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Rapid and Visual Detection of Pasteurella multocida and Riemerella anatipestifer Using Recombinase Polymerase
Jing Li1, Qing-Ling Gu1, Si-Mei Xian2,3
1College of Animal Science Guizhou University Guiyang 550025 China.
Abstract:
To establish a convenient, novel, and visual detection method for on-site diagnosis of Riemerella anatipestifer (RA) and Pasteurella multocida (PM), we used the previously constructed plasmids pMD19-T-ompA and pMD19-T-kmt1 as templates and selected as target sequences the conserved regions of the RA ompA gene sequence and the PM kmt1 gene sequence registered in GenBank. Specific basic primers for recombinase polymerase amplification (RPA) were designed and synthesized. Probes (RA-P, PM-P) were designed according to the requirements of the lateral flow dipstick (LFD) assay. After optimizing the reaction conditions, a dual RPA-LFD method for detecting RA and PM was established, and specificity and sensitivity tests were conducted. The developed method was then applied to 64 clinical samples. The established dual RPA-LFD method completed amplification within 15 min at 37 C. Using the nucleic acids of Escherichia coli from ducks, Salmonella enteritidis from ducks, RA and PM from poultry, Staphylococcus, goose parvovirus, duck plague virus, and Muscovy duck parvovirus as templates, and plasmids pMD19-T-ompA and pMD19-T-kmt1 as positive controls, the dual RPA-LFD detection system showed that only the positive controls yielded positive results, indicating good specificity. Plasmid standards pMD19-T-ompA and pMD19-T-kmt1 were diluted tenfold, and the sensitivity was detected to be 102 copies/µl when plasmid standards with concentrations ranging from 107 to 100 copies/µl were used as templates. For the 64 clinical samples, results were observed directly via the test strips, showing an RA detection rate of 10.93% (7/64) and a PM detection rate of 4.68% (3/64), with a 100% concordance rate with PCR results. The dual RPA-LFD method successfully established in this study has the advantages of strong specificity, high sensitivity, rapidity, and visualization, making it suitable for the on-site detection of RA and PM.
Insights
A novel dual RPA-LFD assay offers rapid, visual detection of Riemerella anatipestifer (RA) and Pasteurella multocida (PM) on-site. This method demonstrates high specificity and sensitivity, making it ideal for field diagnostics in poultry.
Area of Science:
- Veterinary Microbiology
- Molecular Diagnostics
- Biosensing Technologies
Background:
- Riemerella anatipestifer (RA) and Pasteurella multocida (PM) are significant pathogens causing considerable economic losses in the poultry industry.
- Accurate and rapid on-site diagnostic methods are crucial for timely intervention and disease control.
Purpose of the Study:
- To develop a convenient, novel, and visual detection method for the on-site diagnosis of RA and PM.
- To establish a dual recombinase polymerase amplification-lateral flow dipstick (RPA-LFD) assay for simultaneous detection of these two bacterial species.
Main Methods:
- Utilized specific primers targeting conserved regions of the RA ompA and PM kmt1 genes for RPA.
- Designed specific probes for lateral flow dipstick (LFD) assay integration.
- Optimized reaction conditions and validated the dual RPA-LFD assay using clinical samples and comparing results with PCR.
Main Results:
- The dual RPA-LFD assay achieved amplification within 15 minutes at 37°C.
- Demonstrated high specificity by testing against various bacterial and viral pathogens, with no cross-reactivity.
- Sensitivity was determined to be 10^2 copies/µl for both RA and PM.
- Applied to 64 clinical samples, yielding RA and PM detection rates of 10.93% and 4.68%, respectively, with 100% concordance with PCR results.
Conclusions:
- The established dual RPA-LFD method is specific, sensitive, rapid, and visual.
- This assay is well-suited for on-site detection of RA and PM in poultry, facilitating prompt disease management.
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