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Updated: Jul 15, 2026

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
Published on: August 14, 2018
On the timing of eukaryotic origin
Ning Song1, Ke Pang2, Xiaoyuan Feng1
1Archaeal Biology Center, Synthetic Biology Research Center, Shenzhen Key Laboratory of Marine Microbiome Engineering, Key Laboratory of Marine Microbiome Engineering of Guangdong Higher Education Institutes, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.
Abstract:
The emergence of eukaryotes marks a monumental juncture in the 4.6-billion-year evolutionary odyssey of our planet. Despite decades of research, the origin of eukaryotic life remains unresolved, with many of its nuances still veiled in the mists of time. While the progenitors of modern eukaryotes have roots that extend deep into the ancient past, the age of the last common ancestor to all modern eukaryotes - whether this was ancient or relatively recent - continues to spark debates. This review does not seek to settle this controversy but instead synthesizes competing perspectives from paleontology, lipid biology, molecular dating, phylogenetics, and geochemistry, emphasizing the necessity for critical evaluation of conflicting evidence across disciplines. We aim to offer a critically informed, cross-disciplinary synthesis for one of the most significant evolutionary transitions in Earth's history.
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