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MKRN2-Mediated Degradation of IGF2BP3 Suppresses MYC and Enhances CDK4/6 Inhibitor Sensitivity in Bladder Cancer
Qi Pan1, Qing Shi2,3, Yubo Zhao4
1Department of Urology, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200080, China.
Background:
CDK4/6 inhibitors induce G1/S cell-cycle arrest in bladder cancer; however, adaptive resistance limits their therapeutic efficacy. The role of the m6A reader IGF2BP3 in regulating sensitivity to CDK4/6 inhibition remains largely unknown.
Methods:
Transcriptomic profiling was performed in palbociclib-treated bladder cancer cell lines (T24, RT112, and UMUC-3) to identify m6A regulators associated with drug response. The expression and clinical significance of IGF2BP3 were evaluated using The Cancer Genome Atlas (TCGA) data and an independent clinical cohort. Gain- and loss-of-function assays were conducted to investigate the effects of IGF2BP3 on cell proliferation and cell-cycle progression. Mechanistic studies, including RNA-binding, mRNA stability, ubiquitination, and in vivo tumorigenesis assays, were performed to elucidate the underlying regulatory network.
Results:
IGF2BP3 was identified as the only m6A regulator differentially expressed following palbociclib treatment. IGF2BP3 expression was significantly elevated in bladder cancer tissues compared with normal tissues and was associated with poor prognosis and Ki67 positivity. Functionally, IGF2BP3 overexpression (OE) promoted G1/S transition, increased MYC and downstream cell-cycle regulators, and partially rescued palbociclib-induced cell-cycle arrest, whereas IGF2BP3 knockdown (KD) suppressed cell proliferation in an MYC-dependent manner. Mechanistically, IGF2BP3 bound to MYC mRNA in an m6A-dependent manner and enhanced its stability. Furthermore, MKRN2 was identified as an E3 ubiquitin ligase that directly interacted with IGF2BP3, promoted its ubiquitination, and facilitated its proteasomal degradation. In vivo, MKRN2 co-overexpression attenuated IGF2BP3-driven tumor growth and synergized with palbociclib to maximally suppress tumor volume, reduce MYC and Ki67 expression, and induce apoptosis.
Conclusions:
These findings establish the MKRN2-IGF2BP3-MYC axis as a critical regulator of CDK4/6 inhibitor sensitivity in bladder cancer. Targeting IGF2BP3 or enhancing MKRN2 activity may represent a promising strategy to overcome adaptive resistance and improve the therapeutic efficacy of CDK4/6 inhibitors.
Insights
The MKRN2-IGF2BP3-MYC axis regulates CDK4/6 inhibitor sensitivity in bladder cancer. Targeting IGF2BP3 or boosting MKRN2 can overcome resistance and improve treatment efficacy.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Research
Background:
- CDK4/6 inhibitors are used for bladder cancer but resistance limits efficacy.
- The role of the m6A reader IGF2BP3 in CDK4/6 inhibitor resistance is unknown.
Purpose of the Study:
- Investigate the role of IGF2BP3 in bladder cancer's response to CDK4/6 inhibitors.
- Elucidate the regulatory network involving IGF2BP3, MYC, and MKRN2.
Main Methods:
- Transcriptomic profiling of palbociclib-treated bladder cancer cell lines.
- Analysis of IGF2BP3 expression in The Cancer Genome Atlas (TCGA) and clinical cohorts.
- Gain- and loss-of-function assays, RNA-binding, mRNA stability, ubiquitination, and in vivo studies.
Main Results:
- IGF2BP3 was the sole differentially expressed m6A regulator post-palbociclib treatment.
- Elevated IGF2BP3 correlated with poor prognosis and increased MYC/cell-cycle regulators, partially rescuing drug-induced arrest.
- MKRN2 targeted IGF2BP3 for degradation, and its co-overexpression synergized with palbociclib to inhibit tumor growth.
Conclusions:
- The MKRN2-IGF2BP3-MYC axis is crucial for CDK4/6 inhibitor sensitivity in bladder cancer.
- Targeting IGF2BP3 or enhancing MKRN2 offers a potential strategy to overcome resistance to CDK4/6 inhibitors.
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