Environmental Drivers on Blue Tit Nest Microbiome: An Experimental Study
Marina García-Del Río1, Tamara Martin-Pozas2, Sergio Sanchez-Moral3
1Department of Evolutionary Ecology National Museum of Natural Sciences, Spanish National Research Council (CSIC) Madrid Spain.
Ecology and Evolution
|July 15, 2026
Summary
Nest microclimate significantly impacts avian fungal and bacterial communities. Increased humidity and temperature promoted fungal growth, potentially harming Blue Tit nestlings through pathogenic fungi and affecting ectoparasite loads.
Area of Science:
- Avian ecology
- Microbiology
- Environmental science
Background:
- The microclimate within avian nesting cavities influences microbial communities.
- These microbial communities can impact host well-being.
Purpose of the Study:
- To investigate the impact of experimental temperature and humidity manipulations on the Blue Tit (Cyanistes caeruleus) nest microbiome.
- To examine associations between the nest microbiome, parasitism, and host condition.
Main Methods:
- Metabarcoding analysis using 16S rRNA and ITS2 regions.
- Experimental manipulation of nest temperature and humidity.
Main Results:
- Bacterial beta diversity differed significantly with increased humidity, while alpha diversity remained unaffected.
- Elevated temperature and humidity increased fungal richness and altered fungal composition.
- Potentially pathogenic fungi proliferated in humidified nests, correlating with poorer nestling body condition.
Conclusions:
- Nest microclimate is a critical factor shaping avian nest microbiomes.
- Interactions between microclimate, microbial communities, ectoparasites, and nestling development are complex.
- This study provides novel insights into the ecological effects of microclimatic conditions in avian nesting environments.
More Related Videos
Related Concept Videos
Introduction to the Human Microbiota
Microorganisms colonize various regions of the human body, including the mouth, nasal passages, throat, stomach, intestines, urogenital tract, and skin. The total number of microbial cells is estimated to range from 10¹³ to 10¹⁴—comparable to, or exceeding, the number of human somatic cells. This host–microbiome relationship has led to the conceptualization of humans as supraorganisms, wherein microbial communities perform vital roles in development, immunity, and disease...
Development of Human Microbiota
The human microbiota begins developing at birth and undergoes continual change as we age. Infancy marks a critical period of microbial sensitivity, offering a “window of opportunity” during which beneficial microbes help mature the immune system. By age three, children typically develop a more stable and diverse microbial community. Newborns acquire microbes from their immediate environment; vaginal delivery favors maternal vaginal microbes, while cesarean births favor microbes from the skin...
The Oral Microbiota
The oral microbiome includes a complex ecosystem comprising over 700 microbial species, identified through genomic sequencing and culture-based analyses to date. This community includes a core microbiome, found universally among individuals, and a variable component influenced by environmental factors such as diet, lifestyle, and host genetics. Site-specific conditions, including oxygen gradients, pH levels, and nutrient availability, determine the spatial distribution of these microorganisms...
Microbiome of the Eye
The human eye has a specialized microbiota that reflects its unique anatomical and immunological environment. This low-biomass microbial community predominantly colonizes the conjunctiva and eyelid margins, playing a vital role in ocular surface homeostasis and defense. Despite its proximity to the richly colonized facial skin, the ocular surface maintains a distinct microbial profile due to continuous mechanical and biochemical defense mechanisms.The conjunctival surface hosts fewer microbial...
Microenvironments
Microorganisms inhabit highly localized spaces known as microenvironments, which are defined by distinct physical and chemical characteristics. These include oxygen concentration, pH, temperature, light availability, and nutrient levels. The conditions within a microenvironment can differ markedly from those in the surrounding area and significantly influence microbial growth, metabolism, and community structure.Microenvironments often display sharp physicochemical gradients over small spatial...
Microbiota Modulation by Antibiotics
Antibiotics have revolutionized modern medicine by saving countless lives from bacterial infections. However, their widespread use has inadvertently harmed the delicate balance of the human gut microbiota. The gut microbiota, a complex community of bacteria, archaea, viruses, and fungi, plays a vital role in regulating metabolism, immune responses, and maintaining intestinal health. Antibiotics, especially broad-spectrum types, disrupt this ecosystem by eradicating both harmful and beneficial...


