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Overcoming Daraxonrasib Resistance: Allele-Specific Mechanisms Guide Salvage Therapy in Pancreatic Cancer
Daniel Dorbin1,2, Juliannie Herrera1,2, Raven Davidson1,2
1Department of Biochemistry, Medical College of Wisconsin and the LaBahn Pancreatic Cancer Program, Milwaukee, WI.
Abstract:
Clinical-grade RAS inhibitors raise an unresolved question as to whether KRAS-alleles impose constraints on adaptive resistance that can be exploited therapeutically. Using daraxonrasib (RMC-6236), a multi-selective RAS(ON) inhibitor, we compared resistance mechanisms between KRASG12D and KRASG12R, alleles with fundamentally different RAS network dynamics. Daraxonrasib inhibited KRASMUT primarily through steric occlusion of effector binding, while engaging RASWT only modestly (~20%). KRASG12R is marked by its inability to transactivate RASWT, and it was observed that daraxonrasib resistant KRASG12R PDAC cells utilize EGFR/RASWT-GTP signaling as the dominant adaptive route. In contrast, KRASG12D resistance arose through retained KRASG12D-GTP signaling, with a decrease of cyclophilin A (CypA) protein, the binding partner required for daraxonrasib activity. The shift from KRASG12R dependence to the EGFR/RASWT conferred sensitivity to trametinib. We confirmed this clinically: a KRASG12R PDAC patient who progressed after 10 months on daraxonrasib showed intratumoral EGFR/RASWT activation, and rapid 3D-bioprinted patient-derived toroid modeling predicted sensitivity to trametinib-based combination therapy. Given the aggressive disease trajectory and lack of response to the two immediately preceding lines of therapy, sixth-line trametinib-based combination therapy achieved approximately 5 months of disease control. This patient ultimately achieved 40 months of overall survival, far exceeding the 8-12 month median for metastatic PDAC. Collectively, these data establish a framework in which allele-specific RAS network topology dictates the adaptive resistance landscape, enabling rational selection of targeted therapies with meaningful clinical benefit in metastatic PDAC.
Insights
KRAS allele-specific resistance to daraxonrasib involves distinct adaptive pathways. Targeting these pathways, like EGFR/RAS WT signaling, can improve outcomes in KRAS-mutant pancreatic cancer.
Area of Science:
- Oncology
- Molecular Biology
- Pharmacology
Background:
- KRAS mutations are key drivers in pancreatic ductal adenocarcinoma (PDAC).
- Understanding adaptive resistance mechanisms to targeted therapies is crucial for improving patient outcomes.
- RAS allele-specific network dynamics present unique challenges for therapeutic intervention.
Purpose of the Study:
- To investigate the allele-specific resistance mechanisms to the RAS(ON) inhibitor daraxonrasib in KRAS G12D and KRAS G12R mutant PDAC.
- To identify therapeutic strategies to overcome adaptive resistance based on distinct RAS allele-driven pathways.
- To evaluate the clinical efficacy of targeted therapies in a KRAS G12R PDAC patient with acquired resistance.
Main Methods:
- Utilized daraxonrasib (RMC-6236), a multi-selective RAS(ON) inhibitor.
- Compared resistance mechanisms in KRAS G12D and KRAS G12R PDAC cell lines.
- Assessed signaling pathway activation (EGFR/RAS WT-GTP) and protein expression (cyclophilin A).
- Employed rapid 3D-bioprinted patient-derived toroid modeling for therapy prediction.
- Analyzed clinical data from a KRAS G12R PDAC patient.
Main Results:
- Daraxonrasib resistance in KRAS G12R PDAC cells predominantly utilized EGFR/RAS WT-GTP signaling.
- Resistance in KRAS G12D PDAC cells involved retained KRAS G12D-GTP signaling and decreased cyclophilin A (CypA).
- The shift to EGFR/RAS WT signaling in KRAS G12R conferred sensitivity to trametinib.
- Patient-derived toroid modeling predicted sensitivity to trametinib-based combination therapy.
- A KRAS G12R PDAC patient achieved 40 months of overall survival with sixth-line trametinib combination therapy.
Conclusions:
- RAS allele-specific network topology dictates adaptive resistance landscapes in PDAC.
- Downregulation of CypA in KRAS G12D and reliance on EGFR/RAS WT in KRAS G12R are distinct resistance routes.
- Rapid patient-derived toroids can guide effective targeted therapy selection for advanced PDAC.
- Targeted combination therapies can achieve significant and durable responses in metastatic PDAC.
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