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Do Water Molecules Always Stabilize Resonances? Microhydration Effects on Thymine Shape Resonances
Sujan Mandal1, Jishnu Narayanan S J1, Ankita Gogoi1
1Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai400076, India.
Microhydration significantly stabilizes thymine's π* resonances and increases their lifetimes. This stabilization arises from a complex interplay of hydrogen bonding, electrostatic interactions, and geometric changes, crucial for understanding nucleobase behavior in aqueous environments.
Area of Science:
- Computational chemistry
- Theoretical chemistry
- Quantum chemistry
Background:
- Thymine is a fundamental nucleobase.
- Understanding nucleobase interactions in aqueous environments is crucial for molecular biology and chemistry.
- Resonance states play a key role in the electronic properties and reactivity of molecules.
Purpose of the Study:
- To investigate the impact of microhydration on the low-lying π* shape resonances of thymine.
- To quantify changes in resonance positions and lifetimes upon hydration.
- To elucidate the underlying mechanisms responsible for hydration effects on thymine resonances.
Main Methods:
- Utilized the Resonance via Padé approach.
- Employed the EA-EOM-DLPNO-CCSD computational method.
- Benchmarked calculations against projected CAP-EA-EOM-CCSD and compared with experimental data.
Main Results:
- Observed systematic stabilization and increased lifetimes for the 1π* and 2π* resonances upon hydration.
- The 3π* resonance exhibited more complex behavior.
- Resonance lifetimes increased significantly, e.g., from 39 fs to 110 fs for the lowest resonance in a trimer cluster.
- Identified contributions from hydrogen bonding, electrostatic interactions, geometric distortion, and basis set effects.
Conclusions:
- Microhydration leads to genuine physical stabilization of thymine resonance states.
- Resonance stabilization is sensitive to local hydrogen-bonding arrangements and microsolvation geometry.
- A subtle interplay between geometry, basis set effects, and intermolecular interactions governs resonance stabilization in microhydrated nucleobases.
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