Sequence and epitope characterization of VP2 from largemouth bass birnavirus and its implications for DNA vaccine...

Birnaviridae have a wide host range and can infect a variety of fish, causing significant economic losses to the aquaculture industry. Herein, we analyzed the amino acid sequence conservation and antigenic epitope distribution of the VP2 protein to evaluate its suitability as a vaccine antigen, and subsequently developed a full-length VP2-based DNA vaccine to prevent the virus. In detail, bioinformatics analyses revealed that VP2 is highly conserved and contains abundant predicted B-cell and T-cell epitopes. Variation analysis of the VP2 amino acid sequence showed that the homology of VP2 protein among largemouth bass birnavirus (LBBV) strains was 99.8%, indicating that the VP2 protein was relatively conserved. Furthermore, the VP2 gene was inserted into the pcDNA3.1(+) plasmid to construct a DNA vaccine, and the results showed that VP2 could be effectively expressed in CPB cells and fish. Importantly, the qPCR was used to detect MHCⅡ, TNF-a, Mx, and IgM -related immune factors. The results showed that the expression levels of these immune factors were significantly increased after DNA vaccine immunization. In addition, when the largemouth bass (Micropterus salmoides) were challenged with a virulent strain of LBBV, the relative immune protection rate (RPS) was 57.1%, indicating that the DNA vaccine could effectively prevent the LBBV virus. This study developed a reliable vaccine based on the conserved amino acid sequence of VP2 and its abundant antigenic epitopes, marking a significant advancement in the field.