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Updated: Aug 6, 2026

Immunofluorescence Imaging of DNA Damage and Repair Foci in Human Colon Cancer Cells
Published on: June 9, 2020
NDRG1 expression in cancers confers dependence on DNA damage repair and sensitivity to quinacrine
Garik V Mkrtchyan1, Alexander Veviorskiy2, Zarah G Meisen1
1Center for Healthy Aging, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark.
Abstract:
Cancer cells exploit DNA repair to overcome damage and errors induced by rapid proliferation and repressed checkpoints. Thus, the loss of one DNA repair protein can make tumors more susceptible to inhibition of other repair pathways. Here, using in silico methodologies and high-content genetic and cell survival screens, we found that the antimalarial drug quinacrine impaired the DNA damage response (DDR) in multiple cancer cell lines. Quinacrine disrupted the interaction of the stress-response protein NDRG1 with the major segregase VCP, which in turn promoted the degradation of the E3 ubiquitin ligase RNF8 and other proteins that mediate the recruitment of the critical DDR protein 53BP1 to sites of DNA damage. This impaired recruitment of 53BP1 caused increases in the DNA damage marker γH2AX. High NDRG1 expression in tumors correlated with poor survival in patients, and high expression in various cancer cell lines correlated with quinacrine sensitivity. Colorectal carcinoma cells were particularly vulnerable to pharmacological or genetic inhibition of NDRG1, and high NDRG1 expression and mutations in MLH1 and PARP3 resulted in synthetic lethality. Our findings identify combination genetic markers that might be therapeutically exploited in colon cancer, as well as provide a platform for such discovery in distinct cancer types.
Insights
The antimalarial drug quinacrine disrupts cancer
Area of Science:
- Oncology
- Molecular Biology
- Pharmacology
Background:
- Cancer cells utilize DNA repair mechanisms to survive.
- Targeting DNA repair pathways presents a therapeutic strategy for cancer treatment.
- Tumor cells with deficiencies in one repair pathway may be vulnerable to inhibition of others.
Purpose of the Study:
- To investigate the effect of the antimalarial drug quinacrine on the DNA damage response (DDR) in cancer cells.
- To identify the molecular mechanisms by which quinacrine affects DDR.
- To explore potential therapeutic strategies based on quinacrine's activity and cancer-specific vulnerabilities.
Main Methods:
- In silico analysis.
- High-content genetic screening.
- Cell survival assays.
- Protein interaction studies.
- Ubiquitin ligase degradation analysis.
- DNA damage marker assessment.
- Correlation analysis of gene expression with patient survival and drug sensitivity.
Main Results:
- Quinacrine impairs the DDR in various cancer cell lines by disrupting the NDRG1-VCP interaction.
- This disruption leads to RNF8 degradation and impaired recruitment of 53BP1 to DNA damage sites, evidenced by increased γH2AX.
- High NDRG1 expression correlates with poor patient survival and quinacrine sensitivity.
- Colorectal cancer cells exhibit synthetic lethality upon NDRG1 inhibition combined with MLH1 or PARP3 mutations.
Conclusions:
- Quinacrine targets the DNA damage response by interfering with key protein interactions.
- NDRG1 expression levels can predict quinacrine sensitivity and patient prognosis.
- Combination therapies targeting NDRG1, MLH1, and PARP3 show promise for colon cancer treatment.
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