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Technical Developments in Radiology: Enhancing Research Workflows with PACScrawler
Joshy Cyriac1, Ashraya Kumar Indrakanti1, Jakob Wasserthal1
1Department of Radiology and Nuclear Medicine, University Hospital Basel, Petersgraben 4, 4031, Basel, Switzerland.
PACScrawler is an open-source tool that simplifies medical research by indexing imaging data and reports from Picture Archiving and Communication Systems (PACS) and Radiology Information Systems (RIS). This enables faster cohort identification and data retrieval for clinical imaging research.
Area of Science:
- Medical Informatics
- Radiology Research
Background:
- Medical imaging research is often slowed by data silos.
- Accessing imaging studies and reports from Picture Archiving and Communication Systems (PACS) and Radiology Information Systems (RIS) is challenging for cohort creation.
Purpose of the Study:
- To develop PACScrawler, an open-source tool to streamline cohort assembly.
- To enable efficient search and retrieval of imaging studies and reports across PACS and RIS.
Main Methods:
- Developed PACScrawler with a backend crawler to index DICOM/RIS metadata and reports into an Apache Solr/Lucene index.
- Implemented a web interface for multi-parameter search and an on-demand retrieval module for imaging data.
- Evaluated indexing speed, retrieval efficiency compared to manual methods, and utility for LLM-assisted query generation.
Main Results:
- Indexed over 2.3 million examinations from 316,310 patients between 2012 and 2024.
- Routine indexing of 1079 examinations took 26.5 minutes (1.4 seconds/study).
- PACScrawler retrieved 10 head MRI exams 2x faster than manual PACS export; 17/20 LLM-generated queries were usable.
Conclusions:
- PACScrawler reduces technical barriers for clinical imaging research.
- The tool facilitates retrospective cohort identification, data retrieval, and monitoring of imaging trends.
- PACScrawler is adaptable to other clinical settings with PACS/RIS integration.
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