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Updated: Aug 6, 2026

Metagenomic Next-Generation Sequencing of Cerebrospinal Fluid for the Detection of Central Nervous System Pathogens
Published on: April 17, 2026
Cerebrospinal fluid N-glycans as potential biosignatures for developmental and epileptic encephalopathy in children
Chunhui Hu1, Yu Chen2, Deying Liu3
1Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, China.
Insights
Pediatric epilepsy diagnosis can be improved by analyzing N-glycan signatures in cerebrospinal fluid (CSF). Specific N-glycans in CSF show potential as biomarkers for developmental and epileptic encephalopathies (DEE).
Area of Science:
- Neurology
- Biochemistry
- Glycomics
Background:
- Epilepsy is a leading childhood neurological disorder with diagnostic challenges.
- Glycosylation impacts neuronal function and neuroinflammation, but its role in pediatric epilepsy is understudied.
- Understanding glycan profiles is crucial for advancing pediatric epilepsy diagnosis and prognosis.
Purpose of the Study:
- To investigate differential N-glycan signatures in plasma and cerebrospinal fluid (CSF) of pediatric epilepsy patients.
- To identify specific N-glycans associated with focal epilepsy, generalized epilepsy, and developmental and epileptic encephalopathies (DEE).
- To evaluate the diagnostic potential of N-glycan profiles for pediatric epilepsy, particularly DEE.
Main Methods:
- Collected plasma and CSF samples from pediatric epilepsy patients and controls.
- Utilized N-glycome profiling to analyze glycan signatures.
- Developed discriminative models to identify distinct glycan profiles.
- Analyzed the N-glycan biosynthetic network and correlations with protein and sugar levels.
Main Results:
- Distinct N-glycome profiles were identified in plasma and CSF, differentiating epilepsy patients from controls.
- A common set of 11 N-glycans was identified in both fluids for epilepsy detection.
- Elevated mannosylation and mono-sialylation in CSF were significant in DEE cases.
- High mannosylated and mono-sialylated N-glycans showed strong diagnostic potential for DEE.
- Sialylation, galactosylation, and bisection were key in the transition from control to DEE states.
Conclusions:
- N-glycosylation changes in CSF serve as potential biosignatures for pediatric epilepsy, especially DEE.
- Glycoprotein N-glycome profiling warrants further investigation for disease classification and clinical stratification.
- These findings offer new avenues for improving the diagnosis and management of pediatric epilepsy.
Abstract:
Epilepsy is the most prevalent neurological disorder in children, significantly impacting the growth and development of future generations. Despite substantial progress in biomarker discovery, numerous challenges persist in the accurate diagnosis and prognosis of pediatric epilepsy. Glycosylation is known to play a critical role in neuronal function and neuroinflammation, but the differential glycome profile associated with the onset and progression of pediatric epilepsy has not been investigated. This study investigates the alterations in N-glycan signatures present in plasma and cerebrospinal fluid (CSF) from individuals experiencing focal and generalized epilepsy and developmental and epileptic encephalopathies (DEE). Discriminative models demonstrate distinct N-glycome profiles in both plasma and CSF that effectively differentiate between control subjects and those with epilepsy, identifying a specific set of 11 N-glycans common to both biological fluids. Notably, we observed a significant elevation in mannosylation and mono-sialylation of CSF in cases of DEE. High mannosylated and mono-sialylated N-glycans exhibited strong diagnostic potential for DEE. The biosynthetic network of CSF N-glycans indicated that sialylation, galactosylation, and bisection are the primary contributors to the transition from controls to DEE. Furthermore, the abundance of sialylation, fucosylation, and bisection correlated positively with the levels of proteins and sugars in CSF. These findings identify N-glycosylation changes in CSF as biosignatures associated with pediatric epilepsy, especially DEE, and support further evaluation of glycoprotein N-glycome profiling for disease classification and clinical stratification.
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