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Exploring the therapeutic potential of NCX1 in hematological cancers; integration of molecular docking,
Sema Misir1, Serap Ozer Yaman2, Nina Petrović3
1Department of Biochemistry, Faculty of Pharmacy, Sivas Cumhuriyet University, Sivas, Turkey.
Abstract:
Hematological malignancies are highly heterogeneous diseases characterized by dysregulated signaling pathways and limited durable therapeutic responses. Calcium homeostasis has emerged as a critical regulator of cancer cell fate, yet the role of the sodium/calcium exchanger 1 (NCX1/SLC8A1) in leukemogenesis remains poorly defined. In this study, we comprehensively investigated the biological significance and therapeutic potential of NCX1 across major hematological malignancies by integrating transcriptomic analyses, protein-protein interaction networks, experimental validation, and in silico drug repurposing strategies. NCX1 was highly expressed in HL-60, K-562, and Jurkat cells compared to HaCaT controls. Network analyses revealed that NCX1 interacts with key regulators of calcium signaling, immune response, and signal transduction. In AML and CML patient datasets, a strong positive correlation was observed between NCX1 expression and immune-related pathways, while a negative correlation was observed with translation-related processes. Molecular docking analyses demonstrated that several clinically approved compounds, particularly imatinib and nilotinib, interact with NCX1. Molecular dynamics simulation was performed to evaluate the binding stability and safety of imatinib. Remarkably, the comprehensive analysis showed that imatinib exhibited a stable molecular dynamics profile. All these findings have demonstrated NCX1 as a biologically informative marker of myeloid differentiation and a promising therapeutic weak point within calcium signaling networks in hematological malignancies, providing a rationale for future functional and single-cell validation studies.
Insights
The sodium/calcium exchanger 1 (NCX1) is a potential therapeutic target in hematological malignancies. Imatinib and nilotinib show promise for targeting NCX1 in these cancers.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Hematological malignancies are complex diseases with limited treatment options.
- Calcium homeostasis is crucial in cancer, but the role of sodium/calcium exchanger 1 (NCX1/SLC8A1) in leukemia is unclear.
Purpose of the Study:
- To investigate the biological significance and therapeutic potential of NCX1 in hematological malignancies.
- To identify potential drug candidates targeting NCX1.
Main Methods:
- Transcriptomic analyses, protein-protein interaction networks, experimental validation.
- In silico drug repurposing, molecular docking, and molecular dynamics simulations.
Main Results:
- NCX1 was highly expressed in leukemia cell lines and correlated with immune pathways in AML and CML.
- NCX1 interacts with key regulators of calcium signaling and immune response.
- Imatinib and nilotinib showed stable binding interactions with NCX1.
Conclusions:
- NCX1 is a marker of myeloid differentiation and a potential therapeutic target in hematological malignancies.
- NCX1 presents a vulnerable point in calcium signaling networks for cancer therapy.
- Imatinib demonstrates potential for targeting NCX1 in these cancers.