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Comparative whole-exome sequencing of ambulatory patients and transplant recipients with idiopathic dilated
Ju-Hee Lee1, Jinhwa Kong2, Seulgi Kim2
1Department of Internal Medicine, Chungbuk National University College of Medicine, Cheongju, Republic of Korea; Division of Cardiology, Department of Internal Medicine, Chungbuk National University Hospital, Cheongju, Republic of Korea.
Insights
Genetic variants in LMNA are linked to higher risk of heart transplantation or death in Korean patients with idiopathic dilated cardiomyopathy (DCM). TNNT2 variants may indicate favorable recovery in ambulatory DCM patients.
Area of Science:
- Cardiovascular Genetics
- Genomics of Heart Failure
- Translational Medicine
Background:
- Idiopathic dilated cardiomyopathy (DCM) is a leading cause of heart failure and heart transplantation (HTx).
- Genetic factors influencing progression to HTx and arrhythmias in DCM are not fully understood.
- This study investigates genetic associations with adverse outcomes in a Korean DCM cohort.
Purpose of the Study:
- To identify genotype-phenotype correlations in Korean patients with idiopathic DCM.
- To focus on genetic links to heart transplantation (HTx), death, and arrhythmias.
- To explore genetic predictors of left ventricular functional recovery.
Main Methods:
- Whole-exome sequencing in 202 Korean idiopathic DCM patients (56 HTx, 146 ambulatory) and 1,093 controls.
- Analysis of genotype-phenotype correlations for clinical outcomes like HTx, death, arrhythmias, and LVEF recovery.
- Statistical analysis including odds ratios and false discovery rate (FDR) p-values.
Main Results:
- Pathogenic variants found in 32% of DCM patients; LMNA variants predominated in HTx recipients (20% vs. 4%).
- LMNA variants significantly increased odds of HTx/death (OR 14.65) and were associated with arrhythmias.
- TNNT2 variants were linked to favorable left ventricular ejection fraction (LVEF) recovery (OR 6.03).
Conclusions:
- LMNA variants identify a high-risk phenotype for heart transplantation in Korean idiopathic DCM.
- Genetic testing can aid early identification of patients needing advanced heart failure therapies.
- Findings highlight the role of specific gene variants in DCM prognosis and management.
Background:
Idiopathic dilated cardiomyopathy (DCM) is a major cause of advanced heart failure and heart transplantation (HTx), yet the genetic correlates of progression to HTx and transplant-relevant arrhythmic phenotypes remain incompletely defined. We examined the genetics of idiopathic DCM in a Korean population, focusing on HTx/death and arrhythmic outcomes, to identify adverse outcome-linked genotype-phenotype associations.
Methods:
Whole-exome sequencing was performed in 202 Korean patients with idiopathic DCM, including 56 HTx recipients and 146 ambulatory patients, and compared the findings with 1093 population-based controls. Genotype-phenotype correlations were analyzed for major clinical outcomes, including HTx, death, arrhythmias, and left ventricular functional recovery.
Results:
Pathogenic/likely pathogenic variants were identified in 32% of patients (38% in HTx vs 30% in ambulatory patients). TTN was the most frequently affected gene overall (12%), but LMNA variants predominated in HTx recipients (20% vs 4%, p = 0.001). LMNA carriers showed substantially higher odds of HTx/death (OR 14.65, 95% CI 3.32-139.31; FDR p<0.001), and strong association with arrhythmias, including ventricular tachyarrhythmias and atrial fibrillation. Both missense and loss-of-function LMNA variants were associated with adverse outcomes. In contrast, TNNT2 variants were observed exclusively in ambulatory patients and identified a favorable functional-recovery phenotype, with a greater likelihood of LVEF recovery ≥10 percentage points (OR 6.03, 95% CI 1.52-28.71; FDR p = 0.016).
Conclusions:
LMNA variants mark a high-risk transplant-trajectory phenotype in Korean idiopathic DCM. Genetic testing may aid early identification and management of candidates for advanced HF therapies, including HTx and durable MCS.
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