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Updated: Aug 5, 2026

A Simple Fractionated Extraction Method for the Comprehensive Analysis of Metabolites, Lipids, and Proteins from a Single Sample
Published on: June 1, 2017
High-throughput miniaturised solid phase extraction - supercritical fluid chromatography tandem mass spectrometry
Ivan Petřík1, Kateřina Smolková2, Ondřej Novák1
1Laboratory of Growth Regulators, Institute of Experimental Botany of the Czech Academy of Sciences, Šlechtitelů 27, Olomouc, CZ-77900, Czech Republic; Laboratory of Growth Regulators, Faculty of Science, Palacký University Olomouc, Šlechtitelů 27, Olomouc, CZ-77900, Czech Republic.
A new high-throughput workflow using supercritical fluid chromatography tandem mass spectrometry (SFC-MS/MS) enables efficient profiling of acidic phytohormones (plant hormones) in plants.
Area of Science:
- Plant Science
- Analytical Chemistry
- Biochemistry
Background:
- Acidic phytohormones are crucial low-abundance signaling molecules in plants.
- Accurate and efficient profiling of these compounds is essential for understanding plant physiology.
Purpose of the Study:
- To develop a high-throughput workflow for profiling acidic phytohormones.
- To introduce complementary selectivity in sample cleanup and chromatographic separation.
Main Methods:
- Coupling of miniaturized solid-phase extraction (RP-μSPE) with ultra-high performance supercritical fluid chromatography tandem mass spectrometry (SFC-MS/MS).
- Optimization of SFC-MS/MS conditions including stationary phase, mobile phase, and gradient.
- Validation of the workflow for 19 acidic phytohormones.
Main Results:
- The SFC-MS/MS workflow reduced run time from 19 to 11 minutes compared to RP-LC.
- Achieved accuracies within 85-115% and precision of 0.2-14.9%.
- Demonstrated applicability through time-course profiling in wounded Arabidopsis thaliana leaves.
Conclusions:
- The established SFC-MS/MS workflow provides an efficient and selective method for acidic phytohormone profiling.
- This method offers advantages in speed and selectivity over traditional RP-LC workflows.
- The workflow is suitable for plant research, including stress response studies.
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