AI-integrated multi-omics platform to revolutionize anti-metastatic therapy development through circulating tumor

Tadayoshi Hashimoto1,2,3, Taro Shibuki1,4, Takao Fujisawa1,5

  • 1Translational Research Support Office, National Cancer Center Hospital East, Kashiwa, Japan.

Abstract

Insights

Precision oncology needs to integrate circulating tumor cell (CTC) profiling to target metastasis. This approach, using the SCRUM-MONSTAR platform, focuses on cellular plasticity to develop new anti-metastatic therapies.

Area of Science:

  • Oncology
  • Cancer Metastasis Research
  • Translational Medicine

Background:

  • Metastatic disease is the primary cause of cancer mortality, with current precision oncology focusing on primary tumors and cell-free tumor DNA (ctDNA).
  • ctDNA analysis, while valuable, cannot capture the dynamic cellular states and adaptations driving metastasis.
  • Integrating circulating tumor cell (CTC) profiling is proposed as the next frontier in precision oncology.

Purpose of the Study:

  • To propose a framework for integrating CTC profiling into precision oncology to combat metastasis.
  • To leverage the SCRUM-MONSTAR platform for multi-omics analysis of CTCs.
  • To identify and target cellular plasticity programs that drive metastatic spread.

Main Methods:

  • Utilizing the SCRUM-MONSTAR platform for nationwide multi-omics analysis and longitudinal biospecimen collection.
  • Combining matched tissue profiling, serial ctDNA analysis, and single-cell CTC transcriptomics.
  • Employing metabolomics and functional modeling (organoid and mouse) to study metastatic processes like adherent-to-suspension transition (AST).

Main Results:

  • The SCRUM-MONSTAR-CTC framework facilitates a translational ecosystem for anti-metastatic drug discovery.
  • Adherent-to-suspension transition (AST) is identified as a key plasticity program enabling tumor cell survival in circulation and distant organ colonization.
  • The study highlights the potential for identifying metastatic vulnerabilities and developing targeted therapies.

Conclusions:

  • Targeting AST and other metastatic plasticity programs offers a pathway to clinically actionable anti-metastatic therapies.
  • This framework can guide the development of biomarker-guided anti-metastatic trials and accelerate reverse translation.
  • Precision oncology must evolve to target metastasis as a dynamic process, beyond genomic profiling.

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