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Updated: Aug 5, 2026

Constructing Cyclic Peptides Using an On-Tether Sulfonium Center
Published on: September 28, 2022
Design of a cyclic peptide targeting intracellular Staphylococcus aureus
Álvaro Mourenza1,2, Jesús Llano-Verdeja3, Pablo Castañera3
1Grupo EXPRELA, Instituto de Investigación Biomédica de A Coruña (INIBIC), As Xubias, A Coruña, Spain. alvaro.mourenza@udc.es.
Abstract:
Methicillin-resistant Staphylococcus aureus (MRSA) remains a major clinical challenge, particularly intracellular MRSA infections are difficult to treat because antimicrobial agents must combine stability, host-cell access and bacterial target engagement. Cyclotides offer highly stable cyclic scaffolds for peptide engineering, but their use as intracellular antimicrobial protein inhibitors remains largely unexplored. Here, we engineered a cyclotide-grafted derivative of the antimicrobial peptide KTR by inserting it into the MCoTI-I scaffold, generating the cyclic construct MCo-KTR2. Molecular docking and molecular dynamics suggested potential interactions between MCo-KTR2 and the resistance-associated penicillin-binding protein PBP2a. Site-directed mutagenesis and fluorescence polarization assays indicated that specific residues contribute to binding in vitro. Although MCo-KTR2 displayed lower activity than linear KTR in standard MIC assays, cyclotide grafting increased serum stability by more than 30-fold and enhanced cellular uptake, colocalising with cytosolic S. aureus during infection. These properties were associated with improved activity against intracellular bacteria without detectable cytotoxicity or haemolytic activity. Furthermore, MCo-KTR2 showed higher antibacterial activity when combined with the membrane-active compound Visomitin as well as in combination with vancomycin and gentamicin. Together, these findings identify cyclotide grafting as a strategy to improve peptide stability and intracellular delivery, and support MCo-KTR2 as a scaffold for further optimization against intracellular MRSA infections.
Insights
Engineered cyclic peptides (MCo-KTR2) show enhanced stability and cellular uptake, improving treatment of intracellular Methicillin-resistant Staphylococcus aureus (MRSA) infections. This strategy offers a promising scaffold for developing new antimicrobial therapies.
Area of Science:
- Biochemistry
- Molecular Biology
- Drug Discovery
Background:
- Methicillin-resistant Staphylococcus aureus (MRSA) poses a significant clinical challenge, especially intracellular infections, due to difficulties in antimicrobial drug delivery.
- Existing antimicrobial agents struggle to achieve the necessary stability, host-cell penetration, and bacterial target engagement for intracellular pathogens.
Purpose of the Study:
- To engineer a novel cyclic peptide, MCo-KTR2, by grafting an antimicrobial peptide (KTR) onto a cyclotide scaffold (MCoTI-I).
- To evaluate MCo-KTR2's potential as an intracellular antimicrobial agent against MRSA, focusing on stability, cellular uptake, and efficacy.
Main Methods:
- Molecular docking and dynamics simulations to predict interactions with MRSA's penicillin-binding protein PBP2a.
- Site-directed mutagenesis and fluorescence polarization assays to identify key binding residues.
- In vitro assays to assess serum stability, cellular uptake, intracellular activity, cytotoxicity, and haemolytic activity.
- Combination studies with other antimicrobial agents (Visomitin, vancomycin, gentamicin).
Main Results:
- MCo-KTR2 demonstrated a >30-fold increase in serum stability and enhanced cellular uptake compared to linear KTR.
- The engineered peptide colocalized with intracellular MRSA and showed improved activity against intracellular bacteria.
- MCo-KTR2 exhibited no detectable cytotoxicity or haemolytic activity.
- Combination therapies enhanced MCo-KTR2's antibacterial efficacy.
Conclusions:
- Cyclotide grafting is an effective strategy for enhancing peptide stability and intracellular delivery of antimicrobial agents.
- MCo-KTR2 shows promise as a scaffold for developing novel therapeutics against intracellular MRSA infections.
- Further optimization of MCo-KTR2 could lead to improved treatments for challenging bacterial infections.
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