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Elucidating the Growth-Promoting Mechanism of Bacillus safensis in Nipponbare Rice Through Integrated Phenotypic and
Luobing Han1, Zichang Jia1, Shaolong Jiang1
1State Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Physiologia Plantarum
|July 29, 2026
Summary
Bacillus safensis application enhances rice yields and agronomic traits. This soil bacterium shows promise as a biostimulant for sustainable rice farming, boosting grain productivity.
Area of Science:
- Agricultural Science
- Microbiology
- Plant Science
Background:
- Global rice demand requires enhanced grain productivity for sustainable agriculture.
- Bacillus safensis, a halophilic soil bacterium, is known to promote crop growth, but its impact on rice (Oryza sativa L.) is not well understood.
Purpose of the Study:
- To investigate the effects of Bacillus safensis on rice yield and key agronomic traits.
- To explore the underlying molecular mechanisms, including gene expression and alternative splicing, influenced by B. safensis.
Main Methods:
- Application of B. safensis to rice roots and panicles.
- Measurement of agronomic traits: plant height, tiller number, panicle length, panicle weight, grain number per panicle, 1000-grain weight, grain setting rate, and theoretical yield.
- RNA-sequencing (RNA-seq) and KEGG pathway analysis to assess gene expression changes.
Main Results:
- Root and root-panicle co-treatments with B. safensis increased theoretical rice yield by 4.33% and 2.78%, respectively.
- Significant improvements observed in plant height, tiller number, panicle length, and grain number per panicle.
- Field experiments confirmed increased tiller number, grain number, 1000-grain weight, and grain setting rate, resulting in an 8.98% yield increase.
Conclusions:
- Bacillus safensis acts as a potent biostimulant, significantly enhancing rice productivity and agronomic performance.
- The study provides valuable insights into the molecular mechanisms of B. safensis action in rice.
- B. safensis presents a viable biological solution for improving sustainable rice cultivation practices.
Keywords:
Bacillus safensisKEGG pathwayOryza sativa L. ssp. japonicaplant growth‐promoting bacteriarice yieldtranscriptome
