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Published on: June 3, 2009
Calibrating Bayesian inference
Yang Liu1, Jonathan P Williams2, Jan Hannig3
1University of Maryland, College Park, Maryland, USA.
Summary
Pragmatic Bayes in psychology can be misleading if priors mismatch data. Calibrating Bayesian credible regions ensures valid inference, offering a safer approach for psychological research using a novel algorithm.
Area of Science:
- Psychological statistics
- Bayesian inference
- Computational statistics
Background:
- Bayesian statistics is increasingly used in psychology for its uncertainty quantification.
- However, priors are often used computationally, not as genuine beliefs, which can be conceptually ungrounded.
- Standard Bayesian inference can be misleading when prior assumptions mismatch the true data-generating process.
Purpose of the Study:
- To propose an alternative justification for "pragmatic Bayes" through finite-sample performance evaluation.
- To introduce a method for calibrating Bayesian credible regions to achieve frequentist validity.
- To address the vulnerability of standard Bayesian inference to prior-data mismatch.
Main Methods:
- Evaluating finite-sample performance over repeated sampling of data and parameters.
- Developing a novel stochastic approximation algorithm for calibrating Bayesian credible regions.
- Conducting Monte Carlo experiments to compare calibrated and uncalibrated Bayesian inference.
Main Results:
- Uncalibrated Bayesian inference can be liberal (i.e., overly confident) under certain data-generating scenarios.
- The proposed calibration method consistently maintains frequentist validity, regardless of the underlying parameter-generating mechanism.
- The calibration procedure was illustrated using a real-data example in location-scale regression.
Conclusions:
- Finite-sample performance evaluation offers a pragmatic justification for Bayesian methods in psychology.
- Calibrating Bayesian credible regions to frequentist standards provides robust and valid inference.
- The novel stochastic approximation algorithm effectively solves the practical calibration problem.
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