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Cross-population proteome-wide mendelian randomization study identifies likely causal proteins for cardiovascular
Hua Zhong1,2,3, Jingjing Zhu1,2,4, Shuai Liu1,2,3
1Department of Interdisciplinary Oncology, LSU-LCMC Health Cancer Center, School of Medicine, Louisiana State University Health Sciences Center, New Orleans, LA, USA.
Insights
Proteome-wide Mendelian randomization identified 53 protein-cardiovascular disease links across diverse populations. This research highlights population-specific associations and prioritizes 14 targets for drug development, advancing precision medicine.
Area of Science:
- Genetics
- Cardiovascular Medicine
- Proteomics
Background:
- Cardiovascular diseases (CVDs) like heart failure (HF) and peripheral artery disease (PAD) are linked to blood proteins.
- Proteome-wide Mendelian randomization (MR) is valuable for identifying drug targets in European populations but is underutilized in others.
- Limited research exists on the causal roles of plasma proteins in CVDs across diverse ethnic groups.
Purpose of the Study:
- To investigate the causal relationships between 2,922 plasma proteins and five CVDs (atrial fibrillation, coronary artery disease, HF, ischemic heart disease, PAD) using a multi-population approach.
- To identify population-specific protein-CVD associations and potential drug targets for therapeutic development or repurposing.
- To assess the utility of proteome-wide MR in diverse populations for advancing precision medicine in cardiovascular care.
Main Methods:
- Conducted a proteome-wide MR analysis across African, East Asian, and European populations.
- Utilized genetic instrument data from the UK Biobank cohort for 2,922 plasma proteins and five CVDs.
- Employed genetic colocalization to validate significant MR associations and strengthen causal inference.
Main Results:
- Identified 53 significant protein-CVD associations across the studied populations.
- Discovered 16 associations in the African, six in the East Asian, and 31 in the European populations.
- Found four protein-CVD associations unique to the African population and four unique to the East Asian population.
- Prioritized 14 protein-disease pairs as promising candidates for drug development or repurposing through integration with clinical trial data.
Conclusions:
- Proteome-wide MR is a valuable tool for identifying drug targets for CVDs across diverse populations.
- Population-specific protein-CVD associations underscore the need for inclusive genetic research.
- Findings support the development of precision medicine strategies for CVD prevention and treatment.
Abstract:
Blood proteins may play causal roles in cardiovascular diseases (CVDs) such as heart failure (HF) and peripheral artery disease (PAD). Proteome-wide Mendelian randomization (MR) has been widely used to prioritize drug targets for CVD in European populations, but its application to non-European populations remains limited. We conducted a proteome-wide MR analysis to evaluate the potential causal effects of 2,922 plasma proteins on five CVDs-atrial fibrillation (AF), coronary artery disease (CAD), HF, ischemic heart disease (IHD), and PAD. Analyses were performed across African (n = 931), East Asian (n = 262), and European (n = 10,840) populations using genetic instrument data from the UK Biobank cohort. Significant associations were further examined with genetic colocalization to strengthen causal inference. Using MR and colocalization analyses, we identified 53 significant protein-CVD associations across multi-populations, including 16 in African, six in East Asian, and 31 in European populations, respectively. Cross-population comparisons revealed four protein-CVD associations unique to African population and another four specific to East Asian population. Integration with clinical trial data prioritized 14 protein-disease pairs as promising candidates for therapeutic development or drug repurposing. Our findings highlight the value of proteome-wide MR in evaluating drug target applicability across populations. Several protein-disease associations were population-specific, emphasizing the need for inclusive genetic research to inform precision medicine in CVD prevention and treatment.
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