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Combined Immunofluorescence and DNA FISH on 3D-preserved Interphase Nuclei to Study Changes in 3D Nuclear Organization
Published on: February 3, 2013
The Bcl11-Cxxc1 axis regulates stage-specific chromatin accessibility during lymphocyte development
Kazuki Okuyama1, Wooseok Seo2, Hirotaka Takahashi3
1Laboratory for Transcriptional Regulation, RIKEN Center for Integrative Medical Sciences (IMS), Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan; kaokuyam@ncc.go.jp ichiro.taniuchi@riken.jp.
Abstract:
A zinc finger transcription factor, Bcl11b, is crucial for T-lymphopoiesis. A truncated Bcl11b lacking the C-terminal zinc finger disrupts chromatin accessibility in CD4+CD8+ double-positive thymocytes. Screening chromatin modifiers associated with this zinc finger identified Cxxc1, a component of the Set1 complex mediating H3K4me3. Cxxc1 deficiency arrests the CD4-CD8- double-negative-to-double-positive transition, retaining double-negative-like chromatin structure in double-positive thymocytes. Genomic regions bound by Cxxc1 largely overlapped with Bcl11b and were altered upon Bcl11bdeficiency. Similar effects are observed in B-lymphocytes via another Bcl11 family protein, Bcl11a, highlighting the role of Bcl11 family proteins in recruiting Cxxc1 in chromatin modulation during lymphopoiesis.
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