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Candidate Gene Testing in Clinical Cohort Studies with Multiplexed Genotyping and Mass Spectrometry
Published on: June 21, 2018
The clinical utility of carrier screening
Mia J Gruzin1,2, Leslie Burnett3,4
1Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
None:
Carrier screening aims to identify couples at risk of having children with serious genetic disorders. However, screening panels vary markedly in size, gene content and price, with little guidance to assess clinical utility or value. We analysed 89 carrier screening panels from 30 global providers, modelling test performance using pathogenic variants from gnomAD v4.1.0 and ClinVar across ten ancestry groups and two synthetic populations (representing the United States and Australia). We evaluated how panel size, content, price and clinical utility interrelate. We also compared value per dollar spent to guide clinical decision-making and fair pricing. Clinical utility showed no consistent relationship with panel size or price. Instead, mid-sized, pan-ancestry "Goldilocks" panels delivered the greatest utility, outperforming both smaller and larger panels, while delivering more equitable outcomes. We developed a visual "clinical utility meter" to compare relative test performance and an "efficiency frontier" framework to identify the best value tests for a given price. This data-driven framework and visual tool can support rational test design and selection for value-based laboratory medicine.
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