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A foundation model for sleep-based risk stratification and clinical outcomes
Erhan Bilal1, Matheus Lima Diniz Araujo2, Kristen L Beck3
1Digital Health, IBM Research, T.J. Watson Research Center, Yorktown Heights, NY, USA.
Nature Communications
|August 3, 2026
Summary
A new foundation model analyzes sleep study data to identify five distinct patient risk groups for mortality and disease. This approach reveals hidden risk factors missed by traditional metrics, paving the way for precision sleep medicine.
Area of Science:
- Sleep Medicine
- Artificial Intelligence
- Cardiovascular and Neurological Disease Research
Background:
- Clinical sleep studies generate extensive physiologic data, but interpretation often relies on limited metrics like the apnea-hypopnea index.
- Current metrics possess restricted prognostic value for predicting long-term health outcomes.
- There is a need for advanced analytical methods to extract comprehensive risk information from sleep recordings.
Purpose of the Study:
- To develop and validate a foundation model for analyzing complex sleep physiology data.
- To identify latent risk structures within sleep recordings that are not captured by conventional metrics.
- To stratify patients into distinct risk groups based on sleep physiology for improved health outcome prediction.
Main Methods:
- Utilized a foundation model trained on over 10,000 clinical sleep recordings linked to electronic medical records.
- The model learned rich representations of sleep physiology to uncover hidden risk patterns.
- Validated the model's generalizability on an independent dataset (Sleep Heart Health Study) with lower-resolution data.
Main Results:
- Identified five distinct patient risk groups with significantly different trajectories for mortality, cardiovascular, and neurological diseases.
- The highest-risk group exhibited more than double the mortality risk compared to the lowest-risk group.
- Apnea-hypopnea index severity categories demonstrated limited predictive value compared to the foundation model's risk stratification.
Conclusions:
- Foundation models can extract clinically meaningful risk information from routine sleep recordings that conventional metrics miss.
- This approach offers a scalable pathway toward precision sleep medicine.
- Sleep physiology contains complex risk structures that can be leveraged for improved patient prognostication and tailored interventions.