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Updated: Aug 6, 2026

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Determining Bile Duct Density in the Mouse Liver
Published on: April 30, 2019
Baat-Deficient Mice Recapitulate Elevated 7α-Hydroxy-3-Oxo-4-Cholestenoic Acid Observed in a Japanese Patient With
Soma Koga1, Hajime Takei2, Ryutaro Tamura1
1Laboratory of Molecular Pharmacokinetics, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, Japan.
Journal of Inherited Metabolic Disease
|August 5, 2026
Summary
Bile acid Coenzyme A: amino acid N-acyltransferase (BAAT) deficiency impairs bile acid conjugation and surprisingly disrupts bile acid synthesis. This study reveals a new metabolic phenotype and establishes a mouse model for BAAT deficiency research.
Area of Science:
- Biochemistry
- Metabolic Disorders
- Genetics
Background:
- Bile acid Coenzyme A: amino acid N-acyltransferase (BAAT) is crucial for bile acid conjugation, impacting lipid absorption.
- BAAT mutations cause inborn errors, leading to reduced conjugated bile acids and vitamin deficiencies.
- Unexplained clinical features suggest broader metabolic disturbances beyond impaired conjugation.
Purpose of the Study:
- To investigate the metabolic consequences of BAAT deficiency.
- To identify novel metabolic disturbances associated with BAAT loss.
- To establish a relevant in vivo model for studying BAAT deficiency.
Main Methods:
- Serum bile acid and intermediate profiling in a patient with BAAT deficiency.
- Generation of a hepatic Baat knockdown mouse model using AAV-mediated CRISPR/Cas9.
- Integrated analyses including quantitative PCR and stable-isotope tracing.
Main Results:
- Identified elevated 7α-hydroxy-3-oxo-4-cholestenoic acid (7-HOCA) in a patient and the mouse model.
- Observed reduced amino acid-conjugated bile acids and increased 7-HOCA in Baat-deficient livers.
- Demonstrated enhanced cholesterol flux and upregulated bile acid synthesis enzymes in Baat-deficient livers.
Conclusions:
- BAAT deficiency causes dysregulated bile acid synthesis, not just defective conjugation.
- Reveals a previously unrecognized metabolic phenotype of BAAT deficiency.
- Establishes a novel in vivo model for studying bile acid metabolism beyond conjugation defects.

