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Automated Detection and Classification of Pollen Grains Using YOLO-Based Deep Learning Models
Zeynep Türker1, Onur Mutlu2,3, Uğur Şevik2,3
1Department of Biology, Faculty of Science, Karadeniz Technical University, Trabzon, Türkiye.
Microscopy Research and Technique
|August 6, 2026
Summary
An automated system using YOLOv11 deep learning accurately identifies 53 pollen types for honey authentication. This high-throughput method overcomes manual analysis limitations, ensuring reliable botanical origin verification.
Area of Science:
- Palynology
- Computer Science
- Food Science
Background:
- Melissopalynology is crucial for honey authentication, verifying botanical origin, especially for high-value honey from regions like the Anzer Valley.
- Traditional manual pollen analysis is labor-intensive, time-consuming, and prone to observer bias, hindering efficient and standardized authentication processes.
Purpose of the Study:
- To develop and evaluate an automated system for simultaneous detection and classification of 53 ecologically and apiculturally important pollen types from the Anzer Valley.
- To compare the performance of two advanced deep learning object detection models, YOLOv11 and YOLOv12, for automated pollen grain identification.
Main Methods:
- A novel dataset of 2095 light microscopy pollen images was created and augmented to 19,860 images using geometric and photometric techniques.
- Two state-of-the-art object detection models, YOLOv11 and YOLOv12, were trained on the augmented dataset for pollen classification.
- Performance was evaluated using metrics such as mean Average Precision (mAP@0.5) and F1-score, with a focus on generalization to unseen data.
Main Results:
- The YOLOv11 architecture achieved superior performance over YOLOv12, with a mean Average Precision (mAP@0.5) of 93.2% and an F1-score of 0.896.
- The YOLOv11 model demonstrated high generalization capability on unseen data, achieving a recall of 90.6% and effectively handling complex microscopic sample visuals.
- Minimal misclassifications were observed, primarily between morphologically similar pollen grains within the Geraniaceae and Fabaceae families.
Conclusions:
- The developed YOLOv11-based system offers a reliable, high-throughput framework for automated pollen analysis, significantly reducing processing time and maintaining high accuracy.
- This automated approach provides a scalable tool for pollen identification, addressing the limitations of manual microscopy and supporting objective, standardized honey authentication and geographical origin verification.