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Updated: Aug 7, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Rare Heterozygous Loss-of-Function Variants in MCOLN1 Identified in Two Sporadic Patients with α-Synucleinopathies
Chenxin Ying1, Xinhui Chen1, Zhidong Cen1
1Department of Neurology, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Background:
Growing evidence links lysosomal dysfunction to parkinsonism. TRPML1, a lysosomal cation channel encoded by the MCOLN1 gene, is essential for lysosomal function. Biallelic loss-of-function variants in MCOLN1 cause mucolipidosis type IV. However, the role of heterozygous MCOLN1 variants remains unclear.
Methods:
Two patients with α-synucleinopathies underwent clinical evaluation and whole-genome sequencing. The functional effects of TRPML1 variants were assessed using immunofluorescence, lysosomal patch-clamp recording, and autophagic flux assay.
Results:
Two heterozygous MCOLN1 variants were identified: p.E376K in a patient with multiple system atrophy and p.L315del in a patient with early-onset Parkinson's disease. Functional analyses showed that p.L315del disrupted lysosomal localization, and both variants significantly reduced lysosomal currents upon TRPML1 agonist stimulation, with a trend toward impaired autophagic flux, indicating loss of function.
Conclusions:
These findings demonstrate that both variants impair TRPML1 function in vitro, identifying MCOLN1 as a candidate gene for α-synucleinopathies that warrants further investigation in larger cohorts. © 2026 International Parkinson and Movement Disorder Society.
Insights
Heterozygous variants in the MCOLN1 gene impair TRPML1 channel function, suggesting a potential role for MCOLN1 in alpha-synucleinopathies like Parkinson's disease.
Area of Science:
- Neuroscience
- Genetics
- Cell Biology
Background:
- Lysosomal dysfunction is increasingly linked to parkinsonism.
- TRPML1 (encoded by MCOLN1) is a crucial lysosomal cation channel.
- The impact of heterozygous MCOLN1 variants on neurodegenerative diseases is unknown.
Purpose of the Study:
- To investigate the role of heterozygous MCOLN1 variants in alpha-synucleinopathies.
- To assess the functional consequences of identified MCOLN1 variants.
Main Methods:
- Clinical evaluation and whole-genome sequencing of two alpha-synucleinopathy patients.
- Functional assessment of TRPML1 variants using immunofluorescence, lysosomal patch-clamp, and autophagic flux assays.
Main Results:
- Two heterozygous MCOLN1 variants (p.E376K, p.L315del) were found in patients with multiple system atrophy and early-onset Parkinson's disease.
- p.L315del impaired lysosomal localization; both variants reduced TRPML1 currents and showed a trend towards impaired autophagic flux, indicating loss of function.
Conclusions:
- Identified MCOLN1 variants impair TRPML1 function in vitro.
- MCOLN1 is a potential candidate gene for alpha-synucleinopathies, requiring further study in larger patient cohorts.
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