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Updated: Aug 8, 2026

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Establishing Single-Cell Based Co-Cultures in a Deterministic Manner with a Microfluidic Chip
Published on: September 27, 2019
Aggregates-on-chip: a microfluidic device for crowding plant cells in culture
Alyaa Farouk Hessin1, Ajymurat Orozaliev2, Mohammed Ateequr Mohammed1
1Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, United Arab Emirates.
Frontiers in Plant Science
|August 7, 2026
Summary
This study introduces a microfluidic device for plant protoplast aggregates, enabling long-term studies of cell-cell contact and microenvironment influences on growth and division.
Area of Science:
- Plant Cell Biology
- Microfluidics
- Biotechnology
Background:
- Microfluidic devices offer controlled environments for studying cellular properties.
- Understanding cell-cell contact and microenvironmental influences is crucial for plant cell growth.
- Existing microfluidic systems often lack the ability to facilitate cell-cell contact for long-term plant cell studies.
Purpose of the Study:
- To develop a novel microfluidic device enabling sustained cell-cell contact and long-term imaging of plant protoplasts.
- To create a constrained microenvironment that mimics natural plant tissue interactions.
- To investigate the impact of cell-cell contact and microenvironmental cues on plant protoplast behavior.
Main Methods:
- Development of a microfluidic device utilizing arrays of cylindrical cups to form stable protoplast aggregates.
- Incorporation of a porous micro-post design to ensure sustained media flux and prevent hypoxic conditions.
- Implementation of sterile culture conditions with convenient media switching for various assays.
Main Results:
- The microfluidic platform successfully maintained protoplast viability for over two weeks in Arabidopsis thaliana and Zea mays.
- Observed cell growth, cell wall formation, and cell divisions within the confined aggregates.
- Demonstrated significantly higher cell division rates in crowded aggregates compared to isolated cells.
Conclusions:
- The developed aggregates-on-chip platform is a valuable tool for long-term, live-imaging studies of plant protoplast behavior.
- The device facilitates the investigation of how physical confinement, perfusion, and chemical signals impact plant cell growth, regeneration, division, and stress responses.
- This technology advances the study of cell-cell interactions and microenvironmental effects in plant biology.

