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Updated: Aug 9, 2026

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Decoding Natural Behavior from Neuroethological Embedding
Published on: October 3, 2025
Decoding behavior with minimal and interpretable agent models
Giorgio Nicoletti1, Antonio Celani1,2
1Quantitative Life Sciences section, The Abdus Salam International Center for Theoretical Physics (ICTP), Trieste, Italy.
Plos Computational Biology
|August 7, 2026
Summary
This study presents a new method to understand decision-making in any organism by analyzing behavior alone. It reconstructs internal processes, revealing how agents process information and make choices.
Area of Science:
- Computational neuroscience
- Behavioral biology
- Systems biology
Background:
- Decision-making is a fundamental biological process across all scales.
- Understanding the internal mechanisms of decision-making is challenging.
- Existing methods often require detailed knowledge of internal states or environments.
Purpose of the Study:
- To develop a general method for reconstructing decision-making processes from behavioral data alone.
- To create an agent model based on recurrent dynamics over internal states.
- To apply this method to diverse biological agents without prior internal mechanism knowledge.
Main Methods:
- Defining agent models with recurrent dynamics over discrete internal states.
- Encoding and processing sensory information within these states.
- Dictating actions based on internal state computations.
- Validating the method on synthetic agents and experimental data.
Main Results:
- The method accurately reconstructs agent behavior from observations.
- Successfully inferred agent models for rats (evidence accumulation) and mice (decision-making under uncertainty).
- Few internal states were sufficient to accurately reproduce observed behaviors.
Conclusions:
- The developed method offers a powerful tool for understanding decision-making across biology.
- It provides interpretable insights into the computational processes underlying behavior.
- Applicable to diverse organisms, advancing comparative studies of cognition.
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