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Updated: Aug 9, 2026

Comparative Proteomic Analysis of Whole Kidney, Medulla, and Cortical Tubules in Diabetic Pathogenesis of Kidney Injury in Mice
Published on: May 2, 2025
The role of gut microbiome disruption in the development of metabolic dysfunction-associated kidney disease
Michał Witkowski1, Jarosław Przybyciński1, Bartosz Wojciuk2
1Department of Nephrology, Transplantology and Internal Medicine, Pomeranian Medical University, Szczecin, Poland.
Abstract:
Metabolic dysfunction-associated kidney disease (MDAKD) is increasingly recognised as a major clinical consequence of the global rise in obesity, type 2 diabetes, hypertension, and cardiovascular disease. Accumulating evidence suggests that the gut microbiota may contribute to the development and progression of metabolic and renal disorders through complex mechanisms involving microbial metabolites, immune activation, and disruption of the intestinal barrier. This review provides an overview of current knowledge regarding the role of the gut microbiota and gut-derived metabolites in the pathogenesis of chronic kidney disease (CKD) associated with metabolic disorders. Special attention is given to short-chain fatty acids, bile acids, N-trimethylamine oxide, branched-chain amino acids, indoxyl sulfate, p-cresol sulfate, and lipopolysaccharides. Accumulating experimental and clinical evidence suggests that dysbiosis may contribute to chronic low-grade inflammation, insulin resistance, endothelial dysfunction, lipotoxicity, and profibrotic signaling pathways associated with kidney injury and cardiovascular complications. The review also identifies significant limitations in current microbiome research, such as the predominance of animal studies, methodological challenges in metabolite quantification, and difficulties in establishing causality in humans. Emerging therapeutic strategies targeting the gut microbiota, including dietary interventions, prebiotics, probiotics, sodium-glucose cotransporter 2 inhibitors, glucagon-like peptide-1 receptor agonists, and faecal microbiota transplantation, may offer novel approaches to slowing CKD progression and improving metabolic health. However, further mechanistic and clinical studies are required to determine the efficacy of microbiota-targeted therapies in MDAKD.
Insights
Metabolic dysfunction-associated kidney disease (MDAKD) is linked to gut microbiota changes. Dysbiosis contributes to kidney injury and metabolic disorders, but targeted therapies show promise.
Area of Science:
- Nephrology
- Microbiology
- Metabolic Disorders
Background:
- Metabolic dysfunction-associated kidney disease (MDAKD) is a growing concern linked to obesity, diabetes, and hypertension.
- The gut microbiota and its metabolites play a significant role in metabolic and renal health.
- Dysbiosis is implicated in chronic low-grade inflammation, insulin resistance, and kidney injury.
Purpose of the Study:
- To review the role of gut microbiota and metabolites in the pathogenesis of MDAKD.
- To highlight key gut-derived metabolites involved in kidney disease.
- To discuss limitations in current research and emerging therapeutic strategies.
Main Methods:
- Literature review of experimental and clinical studies.
- Focus on gut microbiota composition and function.
- Analysis of specific microbial metabolites (SCFAs, bile acids, TMAO, BCAAs, indoxyl sulfate, p-cresol sulfate, LPS).
Main Results:
- Gut dysbiosis contributes to inflammation, insulin resistance, and endothelial dysfunction in MDAKD.
- Specific metabolites like indoxyl sulfate and p-cresol sulfate are linked to kidney injury.
- Limitations include reliance on animal models and challenges in human causality.
Conclusions:
- Gut microbiota dysbiosis is a key factor in MDAKD pathogenesis.
- Targeting the gut microbiota offers potential therapeutic avenues for MDAKD.
- Further research is needed to validate microbiota-targeted therapies for MDAKD.
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