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Updated: Aug 11, 2026

mirMachine: A One-Stop Shop for Plant miRNA Annotation
Published on: May 1, 2021
microRNA-mediated control of cell fate specification and patterning in Marchantia polymorpha
Adolfo Aguilar-Cruz1, Eduardo Flores-Sandoval2,3, Ye Xu4
1Instituto de Biotecnología y Ecología Aplicada (INBIOTECA), Universidad Veracruzana, Avenida de las Culturas Veracruzanas 101, Col. Emiliano Zapata, C.P. 91090, Xalapa, Veracruz, México.
MicroRNAs (miRNAs) are crucial for plant development. The study reveals that MpDCL1a in Marchantia polymorpha is essential for miRNA biogenesis and that miR166/HD-ZIP regulates auxin for plant body development.
Area of Science:
- Plant molecular biology
- Developmental biology
- Evolutionary biology
Background:
- MicroRNAs (miRNAs) are key regulators of eukaryotic gene expression.
- DICER-LIKE 1 (DCL1) is the master gene for miRNA biogenesis in plants.
- Marchantia polymorpha serves as a model for understanding early land plant evolution.
Purpose of the Study:
- To investigate the function and evolution of miRNAs in land plants.
- To characterize the role of MpDCL1a in Marchantia polymorpha.
- To elucidate the miR166/CLASS III HD-ZIP regulatory circuit's function.
Main Methods:
- CRISPR-Cas9-mediated genomic editing to create MpDCL1a loss-of-function mutants.
- Functional characterization of mutants in Marchantia polymorpha.
- Comparative analysis to infer ancestral land plant characteristics.
Main Results:
- MpDCL1a is indispensable for miRNA biogenesis in Marchantia polymorpha.
- miR166/Homeodomain Zipper Class III pathway regulates auxin synthesis.
- This pathway is critical for cell identity, patterning, meristem function, and plant body development.
Conclusions:
- DCL1, Class III HD-ZIP, miR166, and auxin were integral to the development of the last common ancestor of land plants.
- This study provides a framework for understanding plant cell specification and patterning principles.
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