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Comprehensive Characterization of Tissue Mineralization in an Ex Vivo Model
Published on: September 27, 2024
TaphoSource: An open-source database of experimentally generated bone surface modifications for modeling taphonomic
Trevor L Keevil1, Alex J Pelissero1, Erin Gniewek1
1Department of Anthropology and Geography, Colorado State University, Fort Collins, CO 80523, USA.
Journal of Human Evolution
|August 11, 2026
Summary
A new open-source database, TaphoSource, aids in identifying bone surface modifications (BSMs) using quantitative methods. This resource helps reconstruct predator-prey dynamics and understand ancient carnivory without needing extensive experimental data.
Area of Science:
- Paleontology
- Taphonomy
- Archaeology
Background:
- Bone surface modifications (BSMs) are crucial for reconstructing fossil predator-prey dynamics and trophic interactions.
- Qualitative methods struggle to differentiate BSMs with similar appearances, limiting their use in taphonomic studies.
- Quantitative methods offer improved discrimination but require large experimental BSM datasets, hindering their application.
Purpose of the Study:
- Introduce TaphoSource, an open-source database of experimentally generated and fossilized BSMs.
- Provide researchers with a readily accessible dataset for quantitative BSM analysis.
- Facilitate improved modeling of predator-prey dynamics and ancient carnivory.
Main Methods:
- Generated 942 experimentally created BSMs from five taphonomic actions.
- Collected data from 12 fossilized BSMs at the HWK EE site (Olduvai Gorge).
- Utilized random forest models for BSM classification and action identification.
Main Results:
- Random forest models achieved approximately 73% accuracy in distinguishing experimental BSM categories.
- Successfully trained a model to identify actions responsible for fossilized BSMs using the TaphoSource data.
- The database enables quantitative BSM modeling without generating new experimental data.
Conclusions:
- TaphoSource provides a valuable, open-access resource for quantitative taphonomic research.
- The database supports more accurate reconstruction of ancient carnivory and hominin/non-hominin behavior.
- Facilitates deeper insights into Plio-Pleistocene mammalian carnivory and behavioral evolution.
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