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A Dataset for Fish Segmentation and Tracking in Underwater Videos
Josep Sanchez1, Jose-Luis Lisani2, Ignacio A Catalan3
1Department of Mathematics and Informatics, University of the Balearic Islands, Palma de Mallorca, Spain. josep-sebastia.sanchez@uib.cat.
Scientific Data
|August 12, 2026
Summary
A new underwater fish dataset aids marine ecology and fisheries management. This resource features pixel-level annotations for segmentation and tracking, enhancing underwater vision algorithm development.
Area of Science:
- Marine Biology
- Computer Vision
- Ecological Monitoring
Background:
- Automatic fish monitoring is crucial for marine ecology, fisheries management, and environmental oversight.
- Current progress is hampered by a scarcity of extensive, high-quality fish-specific datasets for underwater imagery.
- Developing robust algorithms requires diverse data reflecting natural habitat variations.
Purpose of the Study:
- Introduce a novel dataset of underwater fish videos with pixel-level segmentation and multi-object tracking annotations.
- Provide a challenging and comprehensive resource for the advancement and evaluation of underwater vision algorithms.
- Facilitate efficient and reproducible annotation within the marine imaging community.
Main Methods:
- Collected underwater videos in the Balearic Sea, encompassing diverse marine environments.
- Annotated video frames for pixel-level segmentation and multi-object tracking with spatial and temporal consistency.
- Developed an open-source, browser-based annotation tool integrating Segment Anything Model (SAM2) and CUTIE for semi-automatic annotation.
Main Results:
- Established a new, high-quality dataset of annotated underwater fish videos.
- Demonstrated the dataset's utility and challenging nature through baseline tracking with Deep OC-SORT.
- Released an accessible annotation tool to streamline the creation of marine imaging datasets.
Conclusions:
- The new dataset significantly advances the development and benchmarking of underwater vision algorithms.
- The provided annotation tool enhances accessibility and reproducibility for marine imaging research.
- This resource is expected to accelerate progress in automated fish monitoring for ecological and management applications.

