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Discovery of ZJC-11 as a Novel Selective CDK7 Inhibitor for Treating Triple-Negative Breast Cancer by Inducing Cell
Bo Chen1,2,3,4, Lihong Wu1,2, Limei Zhang1,2
1Department of Pharmacology, College of Pharmacy, Chongqing Medical University, Chongqing400016, China.
Abstract:
The development of cyclin-dependent kinase 7 (CDK7) inhibitors represents a promising therapeutic strategy for triple-negative breast cancer (TNBC). Herein, we designed and synthesized 21 novel CDK7-targeted small molecules and identified ZJC-11 as a potent lead candidate. ZJC-11 demonstrated significant antiproliferative activity against TNBC both in vitro and in vivo, with reduced toxicity compared to the reported CDK7 inhibitor THZ1. Molecular docking, Kinact/KI tests, kinase selectivity profiling, and pharmacokinetic studies confirmed that ZJC-11 selectively and covalently targets CDK7 with favorable pharmacokinetic properties. RNA sequencing and functional analyses revealed that ZJC-11 not only suppresses transcription and G2/M cell cycle checkpoint pathways but also induces DNA damage-driven cellular senescence, ultimately leading to TNBC cell death. Moreover, ZJC-11 not only exhibited a synergistic anti-TNBC effect when combined with doxorubicin but also alleviated doxorubicin-induced cardiotoxicity, a clinically significant adverse effect, highlighting its promise as a therapeutic candidate for TNBC treatment.
Insights
A novel compound, ZJC-11, shows potent activity against triple-negative breast cancer (TNBC) by targeting cyclin-dependent kinase 7 (CDK7). This inhibitor effectively reduces tumor growth and toxicity, offering a promising new therapeutic avenue for TNBC patients.
Area of Science:
- Oncology
- Medicinal Chemistry
- Molecular Biology
Background:
- Triple-negative breast cancer (TNBC) remains a challenging subtype with limited targeted therapies.
- Cyclin-dependent kinase 7 (CDK7) is an emerging target for cancer treatment, particularly in TNBC.
- Existing CDK7 inhibitors face challenges with toxicity and efficacy.
Purpose of the Study:
- To design, synthesize, and evaluate novel small molecules targeting CDK7 for TNBC treatment.
- To identify a potent and selective CDK7 inhibitor with improved therapeutic profile.
- To elucidate the mechanism of action of the lead compound in TNBC cells.
Main Methods:
- Synthesis and chemical characterization of 21 novel CDK7 inhibitors.
- In vitro and in vivo evaluation of antiproliferative activity against TNBC cell lines and xenografts.
- Molecular docking, Kinact/KI assays, kinase selectivity profiling, and pharmacokinetic studies.
- RNA sequencing and functional assays to determine molecular mechanisms.
- Combination studies with doxorubicin and assessment of cardiotoxicity.
Main Results:
- ZJC-11 identified as a potent lead candidate, demonstrating significant antiproliferative effects against TNBC in vitro and in vivo.
- ZJC-11 selectively and covalently targets CDK7 with favorable pharmacokinetics and reduced toxicity compared to THZ1.
- Mechanism involves suppression of transcription, G2/M cell cycle checkpoint, and induction of DNA damage-driven senescence, leading to cell death.
- ZJC-11 showed synergistic effects with doxorubicin and alleviated doxorubicin-induced cardiotoxicity.
Conclusions:
- ZJC-11 is a promising therapeutic candidate for TNBC, offering potent anti-tumor activity and improved safety profile.
- The dual action of inhibiting transcription/cell cycle and inducing DNA damage contributes to ZJC-11's efficacy.
- ZJC-11's ability to mitigate doxorubicin cardiotoxicity presents a significant clinical advantage for TNBC treatment strategies.
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