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Anatomical Localization of Intracranial Electrodes Using Synthetic MRI Generated from Computed Tomography
Aryan Wadhwa1,2, Rohan Jha1,2, Hargunbir Singh1,2
1Department of Neurosurgery, Harvard Medical School, Mass General Brigham, Boston, Massachusetts, USA.
Neurosurgery
|August 14, 2026
Summary
Deep brain stimulation (DBS) electrode localization using synthetic MRI generated from CT is feasible. This CT-only approach may improve access to imaging analysis when MRI is unavailable.
Area of Science:
- Neurosurgery
- Medical Imaging
- Artificial Intelligence
Background:
- Deep brain stimulation (DBS) relies on accurate localization of intracranial electrodes, typically using MRI and CT.
- CT lacks soft tissue contrast, posing challenges when MRI is inaccessible or contraindicated.
- SynthSR, a deep learning tool, generates synthetic T1-weighted MRI from CT, potentially overcoming MRI limitations.
Purpose of the Study:
- To evaluate the accuracy of DBS electrode localization using synthetic MRI generated by SynthSR from CT.
- To compare SynthSR-based localization with standard MRI-CT fusion methods.
- To assess the feasibility of a CT-only approach for DBS electrode localization.
Main Methods:
- Analysis of CT, MRI, and postoperative CT scans from 44 Parkinson's disease patients undergoing STN-DBS.
- Generation of synthetic T1 MRI scans from preoperative CT using SynthSR.
- Co-registration of postoperative CT to synthetic and real MRIs for electrode localization.
- Comparison of localization accuracy using 3D Euclidean and radial distances and anatomical mapping.
Main Results:
- SynthSR-based localization showed mean radial error of 1.21 mm and Euclidean distance of 1.67 mm, comparable to electrode diameter.
- Anatomical localization concordance was 95.5% for overall STN targeting and 81.8% within STN subdivisions.
- Localization differences varied across cases, indicating areas for further improvement.
Conclusions:
- SynthSR demonstrates preliminary feasibility for DBS electrode localization, offering a viable CT-only alternative.
- This approach can facilitate postoperative evaluation when MRI is unavailable or contraindicated.
- Continued improvement in synthetic image generation may broaden access to imaging-based DBS analysis.
