Single-molecule fluorescence spectroscopy of biomolecular condensates

Single-molecule spectroscopy is emerging as a powerful approach for elucidating the molecular structure and dynamics of biomolecular condensates. Unlike ensemble methods, it can resolve heterogeneous conformations, dynamics, interactions, concentrations, and transport properties across a broad range of length- and timescales, even for minute amounts of biomolecules. Recent applications, especially fluorescence-based methods such as single-molecule Förster resonance energy transfer, fluorescence correlation spectroscopy (FCS), fluorescence anisotropy, and nanosecond FCS, have revealed how proteins and nucleic acids behave within dense phases, and how molecular-scale dynamics relate to mesoscopic properties and biological function. Combined with molecular simulations, these measurements yield mechanistic insight into condensate organization, dynamics, and aging. We highlight recent advances, key applications, and promising directions for probing the properties of condensates with single-molecule spectroscopy.