The spatial revolution in immuno-oncology: artificial intelligence decoding NK cell niches to predict therapeutic

Yun-Qiu Gao1,2,3, Tong Liu1,2,3, Yang Yang1,2,3

  • 1Department of Dermatology, The First Hospital of China Medical University, Shenyang, Liaoning, China.

Frontiers in Immunology
|August 18, 2026
PubMed

Insights

Artificial intelligence (AI) and spatial transcriptomics enhance understanding of natural killer (NK) cells in solid tumors. AI-driven analysis of spatial data optimizes NK cell therapies for improved cancer treatment outcomes.

Area of Science:

  • Immunology
  • Computational Biology
  • Oncology

Background:

  • Natural killer (NK) cells are crucial for innate immunity and cancer immunotherapy.
  • NK cell therapy shows promise in blood cancers but faces challenges in solid tumors due to tumor microenvironment (TME) complexity and limited infiltration.
  • Spatial context of NK cells within tumors significantly impacts their cytotoxic function and therapeutic efficacy.

Purpose of the Study:

  • To review how AI-assisted analysis of spatial and multi-omics data can identify biomarkers for NK cell therapy response.
  • To explore AI applications in optimizing chimeric antigen receptor (CAR)-NK cell engineering and combination therapies.
  • To highlight the shift towards treatment optimization and personalized NK cell immunotherapy strategies.

Main Methods:

  • Analysis of recent studies integrating spatial transcriptomics and artificial intelligence (AI).
  • Characterization of NK cell distribution, functional states, and cellular interactions within the TME using AI.
  • Review of AI's role in biomarker discovery, CAR-NK cell engineering, and combination therapy strategies.

Main Results:

  • AI-assisted spatial analysis provides novel insights into NK cell behavior within the TME.
  • Spatial distribution and interactions are key determinants of NK cell cytotoxic function.
  • AI facilitates the discovery of biomarkers and optimization of NK cell-based cancer therapies.

Conclusions:

  • AI and spatial transcriptomics are transforming NK cell immunotherapy research.
  • Future strategies involve optimizing CAR-NK cell design, combination therapies, and personalized treatment regimens.
  • Explainable AI and 4D dynamic monitoring are essential for developing precise and personalized NK cell immunotherapies, despite current limitations in validation and interpretability.

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