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Updated: Aug 19, 2026

Hybrid De Novo Genome Assembly for the Generation of Complete Genomes of Urinary Bacteria using Short- and Long-read Sequencing Technologies
Published on: August 20, 2021
Genome sequence of Raoultella ornithinolytica from urine isolates
Munok Hwang1, Hosoon Choi1, Dhammika H Navarathna2
1Department of Research, Central Texas Veterans Healthcare System, Temple, Texas, USA.
Abstract:
Raoultella ornithinolytica was isolated from a patient's urine. This strain was misidentified as Klebsiella oxytoca by matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF), but whole-genome sequencing identified it as Raoultella ornithinolytica and detected Raoultella-specific hdc gene. This isolate showed beta-lactams, fluoroquinolones, and tetracycline resistance. Here, we report the genome and antimicrobial susceptibility of this strain.
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