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Published on: July 3, 2025
Proteomic analysis of migrasomes derived from IL-6 amplifier-induced human breast cancer cells
Ananda Bagus Richky Digdaya Putra1, Shogo Saito1, Yuka Iwasaki1
1Department of Chemical Science and Engineering, School of Materials and Chemical Technology, Institute of Science Tokyo, 2-12-1 O-okayama, Meguro-ku, Tokyo 152-8550, Japan.
Abstract:
Migrasomes are extracellular vesicles secreted by migrating cells that mediate intercellular communication and contribute to inflammation and cancer progression. We have previously demonstrated that IL-6 expression is induced in cells that have taken up migrasomes derived from IL-6 amplifier activated cells, suggesting that migrasomes are involved in the propagation of inflammation. However, the molecular changes occurring within migrasomes upon IL-6 amplifier remain unknown. In this study, migrasome-enriched samples were extracted from IL-6 amplification-induced human breast cancer MDA-MB-231 cells by ultracentrifugation, and comparative proteomics analysis was performed. Shotgun proteomics detected a total of 1984 proteins, of which 1339 were detected under all conditions. In the cytokine-stimulated migrasomes, 330 proteins up-regulated and 149 proteins down-regulated compared to starvation condition. Changes associated with IL-6 amplification included the IL-6 pathway kinase JAK1, proteins involved in vesicular transport, and SNARE family members syntaxin-3 and syntaxin-4. After immunostaining, the fluorescence of JAK1 in migrasomes under stimulation condition was approximately 1.5-fold higher than those under starvation condition, consistent with the proteomic result. Furthermore, functional enrichment analysis revealed enhanced expression of pathways related to oxidative phosphorylation, endoplasmic reticulum protein processing, and cell organization. These findings indicate that IL-6 amplifier activation is associated with coordinated changes in migrasome proteins, including those involved in inflammatory signaling and trafficking. This study provides a proteomic understanding of migrasome-mediated inflammatory communication in the tumor microenvironment.
Insights
Migrasomes, vesicles from migrating cells, propagate inflammation. IL-6 amplifier activation causes molecular changes in migrasomes, impacting inflammatory signaling and cell communication within the tumor microenvironment.
Area of Science:
- Cell Biology
- Molecular Biology
- Cancer Research
Background:
- Migrasomes are extracellular vesicles mediating intercellular communication.
- They are implicated in inflammation and cancer progression.
- Previous work suggests migrasomes propagate inflammation via IL-6.
Purpose of the Study:
- To investigate the molecular changes within migrasomes upon IL-6 amplifier activation.
- To understand migrasome-mediated inflammatory communication in the tumor microenvironment.
Main Methods:
- Migrasomes were extracted from IL-6 amplification-induced human breast cancer cells (MDA-MB-231) via ultracentrifugation.
- Comparative shotgun proteomics was performed on migrasome samples.
- Immunostaining and functional enrichment analysis were utilized.
Main Results:
- Proteomics identified significant up-regulation (330 proteins) and down-regulation (149 proteins) in cytokine-stimulated migrasomes.
- Key changes included IL-6 pathway kinase JAK1, vesicular transport proteins, and SNAREs (syntaxin-3, syntaxin-4).
- JAK1 fluorescence increased ~1.5-fold in stimulated migrasomes; pathways for oxidative phosphorylation and ER protein processing were enhanced.
Conclusions:
- IL-6 amplifier activation induces coordinated protein changes in migrasomes.
- These changes involve inflammatory signaling and trafficking machinery.
- This provides a proteomic basis for migrasome-driven inflammatory communication in tumors.
