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Updated: Sep 18, 2026

Whole-Brain 3D Activation and Functional Connectivity Mapping in Mice using Transcranial Functional Ultrasound Imaging
Published on: February 24, 2021
Brain-wide fMRI responses to auditory and visual stimuli in awake mice
Jaakko Paasonen1, Lenka Dvořáková1, Petteri Stenroos1
1A. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Neulaniementie 2, 70210 Kuopio, Finland.
Abstract:
The functions of individual senses are well studied, but the mechanisms of cross-sensory integration remain poorly understood. Although invasive studies in mice can elucidate cellular and circuit-level processes, it is unclear whether mice exhibit macroscale cross-sensory activity comparable to that reported in human imaging studies-an important criterion for the translational relevance of preclinical studies. To address this gap, we investigated responses to unimodal and bimodal auditory and visual stimulation in awake mice using a quiet zero echo time (zero-TE) functional magnetic resonance imaging (fMRI) approach. Both stimulation modalities evoked responses in cross-sensory primary pathways, high-order regions, non-primary thalamus, and cerebellum, indicating robust brain-wide responses to simple sensory stimulation. Bimodal stimulation elicited subadditive responses in regions responsive to both modalities, and primary cortices contained subregions with stronger cross-modal responses. Many of these patterns resembled those observed in humans and non-human primates, suggesting conserved principles across species and supporting the translational value of mechanistic and disease model-oriented studies of cross-sensory processing in mice. In contrast, ketamine-xylazine anesthesia caused widespread suppression of cross-modal and high-order activity during sensory processing, highlighting the importance of performing cross-sensory investigations in awake animals.

