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Updated: Sep 21, 2026

Correlative Microscopy for 3D Structural Analysis of Dynamic Interactions
Published on: June 24, 2013
Modular dual-channel 3D microscopy for resolving fast nanoscale dynamics in soft matter
Steven Huysecom1,2, Francisco Bevilacqua3,4, Roger Bresolí-Obach5
1KU Leuven, Department of Chemistry, Molecular Imaging and Photonics B-3001 Leuven Belgium boris.louis@kuleuven.be susana.rocha@kuleuven.be.
Abstract:
Fast volumetric microscopy is essential for studying dynamic heterogeneous soft matter, but combining 3D imaging with independent detection channels remains challenging, often compromising acquisition speed or resolution. Prism-based multiplane microscopes provide instantaneous 3D imaging by splitting emission into multiple focal planes, yet existing implementations use only one input face of the prism. Here, we introduce M3Scope, a dual-entry prism multiplane microscope that exploits the previously unused second prism input face to create an independent second detection channel. This architecture enables simultaneous 16-plane acquisition across two channels while preserving the temporal (>100 fps) and volumetric advantages of multiplane imaging and without sacrificing signal-to-noise ratio. By exchanging the optical element in a magnetic cube, the same architecture supports dual-color fluorescence, polarization-resolved scattering, and correlative brightfield-fluorescence imaging. We demonstrate the approach in soft-matter microrheology: dual-color 3D tracking reveals probe-size-dependent dynamics during polyacrylamide gelation; polarization-resolved multiplane imaging enables simultaneous translational and rotational tracking of gold bipyramids in high-viscosity media; and brightfield-fluorescence imaging links pNIPAM structural evolution to local tracer mobility. These results establish dual-entry prism multiplane microscopy as a simple route to simultaneous, multimode 3D measurements of nanoscale dynamics in soft matter and biological systems.
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