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Updated: Sep 26, 2026

Electroporation-Based CRISPR-Cas9-Mediated Gene Knockout in THP-1 Cells and Single-Cell Clone Isolation
Published on: February 28, 2025
Rapid and efficient generation of multigene-knockout THP-1 cells using a simple CRISPR-Cas9 protocol
Chihiro Ito1, Yuki Kinomura1, Kensho Kawagoe1
1Department of Biochemistry, Faculty of Pharmacy, Osaka Medical and Pharmaceutical University, Nasahara 4-20-1, Takatsuki, Osaka, 569-1094, Japan.
Abstract:
THP-1, a widely used human monocytic leukemia cell line, has been described as one of the hard-to-transfect suspension cell lines. Here, we present a rapid and efficient method for generating multiplex gene knockout cells from THP-1 using a simple co-transfection strategy based on the CRISPR-Cas9 system. In this method, THP-1 cells were transfected with a mixture of pX330-based sgRNA plasmids and a small amount of puromycin-resistance plasmid by electroporation, followed by transient selection with high-dose puromycin. This simple method resulted in efficient simultaneous knockout of multiple genes. For genes important for survival and/or cell proliferation, gene-knockout clones may be isolated by the limiting dilution method immediately after puromycin selection.•A simple co-transfection strategy to knock out multiple genes simultaneously in the human monocytic leukemia cell line, THP-1.•Transient selection with high-dose puromycin appeared to be effective for efficient knockout.•In general, knockout efficiency is satisfactory, and polyclonal knockout cells can be used without a cloning step unless the target gene plays a critical role in cell survival or proliferation.

