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Published on: November 15, 2024
Microbial aldehyde-alcohol dehydrogenase degrades metformin to limit therapeutic response in type 2 diabetes
Yue Zhao1, Chen Peng1, Ying Xia2
1The State Key Laboratory of Pharmaceutical Biotechnology, Chemistry and Biomedicine Innovation Center (ChemBIC), Department of Endocrinology, Endocrine and Metabolic Disease Medical Center, Nanjing Drum Tower Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing 210000, China; Jiangsu Key Laboratory of Molecular Medicine, Division of Immunology, Medical School, Nanjing University, Nanjing 210000, China.
Abstract:
Metformin is a first-line therapy for type 2 diabetes, yet therapeutic responses vary widely. Whether gut microbes directly inactivate metformin and limit its efficacy remains unclear. Here, we identify a gut microbial aldehyde-alcohol dehydrogenase, AdhE, from Eubacterium species enriched in individuals with a low response to metformin. AdhE converts metformin to pharmacologically inactive products, lowering intestinal and systemic drug exposure. Genetic deletion of AdhE or phage-mediated depletion of AdhE-producing Eubacterium hallii MD1 restores metformin exposure and glycemic control in mice. An artificial intelligence-guided structure-based screen identifies the dietary phytochemical daidzein as a microbial AdhE inhibitor that blocks metformin degradation and improves metformin responsiveness. These findings establish gut microbial drug inactivation as a modifiable determinant of therapeutic response and provide a framework for microbial enzyme-guided strategies to improve established therapies.
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