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Updated: Oct 21, 2026

Multi-layer Cortical Ca2+ Imaging in Freely Moving Mice with Prism Probes and Miniaturized Fluorescence Microscopy
Published on: June 13, 2017
Cortex-wide imaging in naturally behaving mice with 1-gram wireless mesoscopes
Yuanlong Zhang1,2, Angran Li3,4, Lekang Yuan5
1IDG/McGovern Institute for Brain Research, Tsinghua-Peking Center for Life Sciences, School of Life Sciences, State Key Laboratory of Membrane Biology, Center for Life Sciences and Artificial Intelligence, Tsinghua University, Beijing, China.
Abstract:
Revealing how distributed cortical circuits coordinate behavior in freely moving animals remains a central challenge in systems neuroscience, constrained by limited fields of view, low throughput, and the tethering required by current miniaturized microscopes1-4. Here, we present Airscope, a wireless mesoscope delivering 4 μm lateral resolution across a 6 mm field of view at 12.5 Hz, weighing 1.0 gram. An aspheric-lens design achieves a 2.84× shorter total track length than previous miniaturized microscopes1,2,5,6 while matching the neuron yield of benchtop one-photon mesoscopes; a tailored wireless link supports cable-free calcium imaging from >8,500 neurons per animal (25‑fold increase). Paired with a zero-shot behavior analyzer, Airscope enables cortical imaging across rich behavioral conditions, including room-scale enriched arenas, swimming assays, and multi-organ implantation, with concurrent recording from multiple animals. Using Airscope, we demonstrate versatile applications of untethered cortical imaging across diverse behavioral paradigms. We identify cortical activity patterns across multiple dorsal regions that correlate with behavioral signatures of social dominance, and show dorsal-cortical population activity prospectively decodes competition outcomes across paired animals. We observe reward-location-associated cortical activity patterns during maze exploration, and characterize Granger-causal influence from spinal cord to cortex during fear conditioning, enabled by simultaneous brain-spinal recordings. By uniting large-scale, cellular-resolution recording with unconstrained behavior, Airscope makes naturalistic, multi-animal cortical recording experimentally practical, and provides a broadly accessible technology for systems neuroscience.

