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Updated: Oct 21, 2026

Three-dimensional Optical-resolution Photoacoustic Microscopy
Published on: May 3, 2011
Dynamic quantitative photoacoustic tomography under sparse sampling via residual-driven Kalman filter assisted
Ye Wu1, Wenxing Bai1, Pengfei Zhang1,2
1School of Precision Instrument and Optoelectronics Engineering, Tianjin University, Tianjin, 300072, China.
Abstract:
Mechanically scanned photoacoustic tomography (PAT) provides high detection sensitivity and flexible system configurations, but its application to dynamic quantitative imaging is limited by the trade-off between temporal resolution and spatial sampling density. We propose a coordinated acquisition-estimation-reconstruction (AER) framework for dynamic quantitative PAT under sparse-pattern sampling. Sparse-pattern cyclic (SPC) acquisition collects baseline-referenced differential signals, while residual-driven adaptive Kalman filtering (RDAKF) adapts location-specific state-transition matrices at sampled locations and uses neighborhood-weighted transition information to propagate states at unsampled locations. The recovered spatially complete differential PA waveforms are then used to reconstruct absorption-coefficient perturbations through adjoint-based, PDE-constrained optimization. The framework was evaluated in numerical simulations, dynamic phantom experiments, and ex vivo tissue experiments using a single-element transmission-mode PAT system. Across multiple sparse-pattern configurations in the dynamic phantom experiment, structural similarity index values of 0.81-0.84 and root-mean-square errors of 0.017-0.023 mm⁻¹ were obtained. In the single-location-per-pattern configuration, the mean sparse-pattern acquisition rate was approximately 0.84 Hz. The framework tracked gradual, abrupt, periodic, and motion-associated variations, supporting the feasibility of dynamic quantitative PAT under measurement-limited conditions.

