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Updated: Oct 26, 2026

Hydrogen Production and Utilization in a Membrane Reactor
Published on: March 10, 2023
Do small hydrogen-containing gas molecules support low deuterium in mitochondrial water?
1Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, United States.
Abstract:
Deuterium is a natural heavy isotope of hydrogen, containing a neutron as well as a proton, making it twice as heavy. Mitochondrial ATP synthase nanomotors are highly sensitive to deuterium, because it impedes the flow of protons through the nanomotors and causes the γ C-terminal helix to unwind. It appears that metabolic processes have evolved to devise ways to reduce the deuterium load in the mitochondria, primarily, we argue, by exploiting several small hydrogen-containing molecular gases. We propose that, when a gas is produced, deuterium, due to its extra weight, tends to stay behind in the aqueous medium, so the gas becomes deuterium-depleted. Furthermore, many of the enzymes that synthesize and/or metabolize these small gas molecules fractionate out deuterium by exploiting proton tunneling. We hypothesize that the gut microbes play a crucial role in producing deuterium-depleted gas molecules, such as hydrogen gas (H2), methane (CH4), ammonia (NH3), hydrogen sulfide (H2S), trimethylamine (TMA), formaldehyde (HCHO), and methanethiol (CH3SH). Gut microbial metabolism of TMA likely provides a low-deuterium source of one-carbon (1C) units to fuel the methylation pathway in the host. The glutamate-glutamine exchange that takes place between astrocytes and neurons plausibly capitalizes on NH3 to preferentially deliver 1H (protons) to neuronal mitochondria. Red blood cells actively import NH3 while the cation NH4 + is excreted in the urine, possibly as a strategy to fractionate out deuterium. In this paper, we investigate how small molecular hydrogen-containing gases are handled in metabolism, from a perspective that considers that these gases may serve a useful role in reducing the deuterium content in the mitochondria. Our hypothesis awaits validation by expert researchers who can perform appropriate experiments to test the hypothesis.
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