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Navigating the BERMUDA triangle of scientific software: A modular approach to data, hardware, and algorithm design in
Julia Szczuczko1, Antonina Dobrowolska1, Emil Sujkowski1
1Institute of Physics, Faculty of Physics, Astronomy, and Informatics, Nicolaus Copernicus University in Toruń, Grudziądzka 5, 87-100 Toruń, Poland.
Abstract:
Modern quantum-chemistry software must support increasingly complex methods, heterogeneous hardware, reusable data structures, and user-facing workflows without losing maintainability. Using PyBEST as a case study, this work discusses how such complexity can be organized within the Python programming language through modular interfaces rather than scattered across method-specific implementations. The central motif is the Balanced pythonic Environment for Research with Modular Unified Design and Abstractions (BERMUDA) Triangle: data representation, computational execution, and algorithmic organization, showcasing how implemented components and ongoing architectural developments-including backend-independent tensor contractions, an effective-Hamiltonian infrastructure, a domain-aware linear-algebra layer, the DAISpY charge-transfer analysis, and graphical input preparation-can be organized within one coherent ecosystem. The resulting perspective treats scalability not only as a numerical goal, but also as a software-design property: scientific codes remain sustainable when new features can be added without obscuring the route from theory to implementation and interpretation.
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