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Updated: Oct 29, 2026

Structure and Coordination Determination of Peptide-metal Complexes Using 1D and 2D 1H NMR
Published on: December 16, 2013
Encoding metal coordination pathways and nuclearity by molecular knotting
Guanyu Chi1, Bo Li2, Hai-Na Feng3
1Department of Chemistry, Fudan University, Shanghai 200438, People's Republic of China.
Abstract:
Precise control over the nuclearity and spatial organization of metal ions is a central objective in coordination chemistry. Knotting imposes severe geometric constraints on frameworks but has rarely been exploited to organize inequivalent metal-binding sites within a single ligand. Here we report that a molecular cinquefoil knot containing both bidentate and tridentate chelating sites enables programmed metal-ion coordination pathways. Direct metalation affords Mn(II)5-, Fe(II)5-, Co(II)5-, and Cd(II)5-knots through a dinuclear intermediate and an unusual 2-to-5 metal nuclearity progression, even though these metals do not template knot formation. Crystallization of a Mn(II)2-intermediate reveals partial demetalation but retains a Mn(II) center displaying a "3 + 3" coordination mode, whereas all Fe(II) ions in the fully metalated Fe(II)5-knot adopt a "3 + 2" binding geometry. Together with computational simulations, these observations support a stepwise metalation mechanism in which the dinuclear "3 + 3" coordination environment evolves into the "3 + 2" motif of the pentanuclear knot. Although the Ni(II)5- knot cannot be obtained by direct metalation because of slow incorporation, it forms readily via transmetalation from a Zn(II)5-knot. Circular dichroism measurements show that chiral expression is dictated by the overall ligand arrangement rather than the identity of the metal ions. The work demonstrates molecular knotting as a strategy for pathway-controlled multi-metallic assembly.
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