Electron Spin Decoherence due to Hindered Rotation in Donor-Bridge-Acceptor Linked Molecules
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Updated: Nov 11, 2026

Site Directed Spin Labeling and EPR Spectroscopic Studies of Pentameric Ligand-Gated Ion Channels
Published on: July 4, 2016
1Department of Science, Niigata University, 950-2181Niigata, Japan.
Abstract:
Extraordinarily broad line widths for the magnetic field effects (MFEs) on radical pair recombination in rigid oligoaromatic donor-bridge-acceptor molecules have been successfully simulated by the full-hybrid Monte Carlo (MC) MD simulation, in which modulation of the exchange coupling due to hindered rotation is directly calculated. It has been demonstrated that the single-site Liouville equation gives nearly identical results at general diffusional rotation times (< a few nanoseconds) if the effective exchange coupling and singlet-triplet dephasing rate constants are estimated from the electron-only MC simulation of spin coherence. Furthermore, the single-site model is applicable to multinuclear simulations of the so-called low-field effect, which is due to the coherent superposition of the degenerate zero-field eigenstates. These findings ensure MD-assisted spin dynamics simulations with high accuracy and fewer computational resources.
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