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Related Concept Videos

Redox Reactions01:24

Redox Reactions

Oxidation-reduction or redox reactions involve the transfer of electrons from one molecule or atom to another. When an atom gains an electron, another atom must lose an electron, meaning oxidation and reduction must occur together. Since the redox occurs in pairs, the atom that gets oxidized is also called the reducing agent or reductant, and the atom that is reduced is also called the oxidizing agent or oxidant. A straightforward way to remember the definitions of oxidation and reduction is...
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EPR Monitored Redox Titration of the Cofactors of Saccharomyces cerevisiae Nar1
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Published on: November 26, 2014

Ribonucleotide reduction and the possible role of cobalamin in evolution.

S R Dickman

    Journal of Molecular Evolution
    |December 29, 1977
    PubMed
    Summary

    This study explores how cells convert ribonucleotides into deoxyribonucleotides, a process essential for DNA synthesis. Two enzyme systems are known to perform this task: one uses iron and is widespread, while the other uses vitamin B12 and is rare. The authors suggest that the B12 system may have been evolutionarily prior to the iron-based one. This hypothesis is based on the distribution and structural differences of the two systems. The B12 system is found in fewer species and has simpler components, suggesting it may have been the first to evolve. The study does not claim that the B12 system is essential for all DNA synthesis, but it proposes that it may have been necessary for the development of DNA genomes.

    Keywords:
    Ribonucleotide metabolismDNA synthesis evolutionCobalamin in biologyThioredoxin function

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    Studying Ribonucleotide Incorporation: Strand-specific Detection of Ribonucleotides in the Yeast Genome and Measuring Ribonucleotide-induced Mutagenesis

    Published on: July 26, 2018

    Area of Science:

    • Molecular biology of DNA replication
    • Evolutionary biochemistry
    • Ribonucleotide metabolism research

    Background:

    Biological systems require deoxyribonucleotides for DNA synthesis. Prior research has shown that two distinct enzyme systems can catalyze ribonucleotide reduction. One system uses iron-based enzymes and is widespread in nature. The other system depends on vitamin B12 and is limited to specific organisms. This gap motivated the exploration of how these systems might relate to genome evolution. No prior work had resolved whether one system preceded the other in evolutionary history. The distribution patterns of these systems suggest a possible chronological order. The iron-based system is more common than the B12-dependent one. That uncertainty drove the analysis of their structural and functional differences. This gap motivated the hypothesis that the B12 system might have been evolutionarily prior.

    Purpose Of The Study:

    The aim of this work is to examine the evolutionary relationship between ribonucleotide reduction systems and genome development. The specific problem is understanding how deoxyribonucleotide synthesis might have influenced DNA genome evolution. The motivation comes from the distinct distributions of the two systems across species. The B12-dependent system is rare, while the iron-based system is widespread. This observation raises questions about their temporal order. The study addresses whether one system could have been necessary for genome evolution. The focus is on the role of vitamin B12 in early DNA synthesis. The goal is to clarify if the B12 system preceded the iron-based one.

    Main Methods:

    The authors reviewed the biological mechanisms of ribonucleotide reduction. They compared two enzyme systems: one using iron and the other using cobalamin. The study analyzed the components of each system, including enzymes and cofactors. The distribution of these systems across species was evaluated. The authors examined the structural differences between the two systems. They considered the role of thioredoxin and disulfhydryl compounds in each system. The analysis included the products of each reduction pathway. The study focused on evolutionary implications of these differences.

    Main Results:

    The iron-based system is found in most bacteria, higher organisms, and animals. The B12-dependent system is restricted to a few bacterial and algal species. The iron-based system uses thioredoxin and NADPH as cofactors. The B12 system uses adenosyl cobalamin and disulfhydryl compounds. The B12 system is considered more primitive than the iron-based one. The authors propose that the B12 system preceded genome evolution. The distribution of these systems supports the hypothesis of a temporal order. The structural differences suggest distinct evolutionary origins.

    Conclusions:

    The authors suggest that the B12-dependent system may have been necessary for DNA genome evolution. The iron-based system is more widespread and structurally complex. The B12 system is limited to specific organisms and simpler structures. The authors propose that the B12 system preceded the iron-based one. The distribution patterns support the idea of an evolutionary sequence. The structural differences between the systems are significant. The study does not claim that the B12 system is essential for all DNA synthesis. The findings suggest a possible evolutionary path for genome development.

    The authors propose that the B12 system may have been necessary for DNA genome evolution, based on its distribution and structural simplicity.

    The iron system uses thioredoxin and NADPH, while the B12 system uses adenosyl cobalamin and disulfhydryl compounds.

    It is found in fewer species and has simpler structural components compared to the iron-based system.

    Thioredoxin acts as a cofactor in both the iron-based and B12-dependent systems.

    Adenosyl cobalamin is a key cofactor in the B12-dependent ribonucleotide reduction system.

    The study suggests that the B12-dependent system may have preceded the development of DNA genomes.