Related Experiment Video
Updated: Jul 21, 2026

09:20
CRISPR-Mediated Reorganization of Chromatin Loop Structure
Published on: September 14, 2018
Modulation of transfected gene expression mediated by changes in chromatin structure
Cell
|December 1, 1982
Summary
Gene expression can switch rapidly due to changes in chromatin structure. This study observed high-frequency switching of the herpes simplex virus thymidine kinase (HSV-tk) gene in mouse cells, linked to chromatin accessibility.
Area of Science:
- Molecular Biology
- Genetics
- Epigenetics
Background:
- The herpes simplex virus thymidine kinase (HSV-tk) gene is a model for studying gene regulation.
- Understanding gene expression modulation is crucial for gene therapy and molecular biology research.
Purpose of the Study:
- To investigate the molecular mechanisms underlying the modulation of the transfected HSV-tk gene in mouse fibroblasts.
- To determine the basis for high-frequency phenotypic switching observed in HSV-tk expressing cells.
Main Methods:
- Utilized a tk+ mouse fibroblast cell line capable of reversion to a tk- phenotype and subsequent rereversion to tk+.
- Analyzed enzyme activity and tk-specific transcripts in revertant and rerevertant cells.
- Assessed foreign DNA organization, CpG methylation patterns, and chromatin structure using DNAase I digestion.
Main Results:
- A tk+ cell line exhibited high-frequency (5%) reversion to tk- and rereversion to tk+.
- Revertants lacked tk enzyme activity and transcripts, with no changes in DNA organization or methylation.
- Rerevertant cells showed increased DNAase I sensitivity in tk sequences, indicating altered chromatin structure.
Conclusions:
- High-frequency gene expression switching is mediated by changes in chromatin structure.
- These chromatin modifications may reflect the influence of host DNA sequences at the integration site.
- The findings provide insights into dynamic gene regulation and epigenetic mechanisms.
Related Concept Videos
What is Gene Expression?
Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Regulation of Expression Occurs at Multiple Steps
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
What is Gene Expression?
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is comprised of nucleotides and proteins are comprised of amino acids, a mediator is required to convert the information encoded in DNA into proteins. This mediator is the messenger RNA (mRNA). mRNA copies the blueprint from DNA by a process called transcription. In eukaryotes, transcription occurs in the nucleus by complementary base-pairing with the DNA template. The mRNA is then processed and...
Regulation of Expression Occurs at Multiple Steps
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Structure of a Gene
A gene is the fundamental unit of heredity. Every individual has two copies of each gene, one inherited from each parent. Although most people contain the same genes, there is a small fraction that is slightly different amongst people. A gene with a small difference in its sequence of DNA bases forms different alleles, contributing to different phenotypes.
However, only 1% of the DNA is composed of genes that encode proteins; the rest, 99% is non-coding DNA. This non-coding DNA performs...
However, only 1% of the DNA is composed of genes that encode proteins; the rest, 99% is non-coding DNA. This non-coding DNA performs...
Regulation of Expression at Multiple Steps
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...

