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Amplification, Next-generation Sequencing, and Genomic DNA Mapping of Retroviral Integration Sites
Published on: March 22, 2016
Molecular cloning of infectious integrated murine leukemia virus DNA from infected mouse cells
Abstract:
The lack of an endonuclease EcoRI site in the AKR murine leukemia virus (MuLV) DNA genome was utilized to molecularly clone, in Charon 4A lambda DNA, integrated infectious AKR MuLV DNA isolated from productively infected mouse cells. Three lambda-mouse recombinants (clones 614, 621, and 623) were selected by virtue of their reactivity with AKR MuLV [32P]cDNA. Clones 614 and 623 contained the complete AKR MuLV DNA flanked by nonviral cell sequences of which no more than 100 base pairs beyond the viral DNA appear to be shared. DNAs from both clones 614 and 623 were highly infectious for mouse cells and yielded N-tropic ecotropic MuLV; the specific infectivity of the DNA and the titer of the derived virus was more than 10-fold higher with 623. Clone 621 contained only some viral DNA and was not infectious under similar conditions.
Insights
Researchers cloned infectious AKR murine leukemia virus (MuLV) DNA from infected mouse cells. Clones 614 and 623 contained complete viral DNA, with clone 623 showing higher infectivity in mouse cells.
Area of Science:
- Molecular Biology
- Virology
- Genetics
Background:
- Murine leukemia viruses (MuLV) are retroviruses that can cause leukemia in mice.
- Understanding the molecular structure and infectious properties of MuLV is crucial for studying retroviral pathogenesis.
- The AKR strain of MuLV is a common model for studying retroviral-induced leukemogenesis.
Purpose of the Study:
- To molecularly clone integrated infectious AKR MuLV DNA from infected mouse cells.
- To characterize the cloned viral DNA and assess its infectivity.
- To identify specific viral and flanking cellular sequences associated with infectious MuLV.
Main Methods:
- Utilizing the absence of an EcoRI site in the AKR MuLV genome for molecular cloning.
- Cloning integrated viral DNA into Charon 4A lambda DNA.
- Screening lambda-mouse recombinants using AKR MuLV [32P]cDNA.
- Assessing the infectivity of cloned viral DNA in mouse cells.
Main Results:
- Three lambda-mouse recombinants (clones 614, 621, 623) reactive with AKR MuLV cDNA were isolated.
- Clones 614 and 623 contained complete AKR MuLV DNA with minimal flanking nonviral sequences (≤100 bp).
- DNAs from clones 614 and 623 were highly infectious, yielding N-tropic ecotropic MuLV; clone 623 exhibited >10-fold higher specific infectivity and viral titer.
Conclusions:
- The study successfully molecularly cloned infectious AKR MuLV DNA, enabling further genetic and functional studies.
- Clone 623 represents a highly efficient source of infectious AKR MuLV DNA for research.
- The findings provide insights into the structure of integrated MuLV genomes and their infectious potential.

