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Isolation of mRNAs Associated with Yeast Mitochondria to Study Mechanisms of Localized Translation
Published on: March 15, 2014
Submitochondrial localization, cell-free synthesis, and mitochondrial import of 2-isopropylmalate synthase of yeast
Abstract:
2-Isopropylmalate synthase (EC 4.1.3.12) of yeast is a mitochondrial enzyme. We now provide evidence showing that a large part of the 2-isopropylmalate synthase activity that is associated with the mitochondria is located in the mitochondrial matrix. In vitro translation of total yeast RNA followed by immunoprecipitation with anti-2-isopropylmalate synthase antibody yields two polypeptides. The larger of these has an apparent molecular weight identical to that of purified 2-isopropylmalate synthase subunit (ca. 65,000). It is incorporated into isolated yeast mitochondria with no detectable change in molecular weight. The import requires energy. The smaller polypeptide migrates to a position corresponding to a molecular weight of 63,000-64,000. It is not taken up by mitochondria. Both polypeptides, which also can be obtained by immunoprecipitation of crude extracts, become labeled when in vitro translation is performed in the presence of N-formyl[35S]methionyl-tRNAf. Mutants with no detectable 2-isopropylmalate synthase activity are deficient in either one or both synthase-related polypeptides. These results are discussed in the light of recent evidence for two 2-isopropylmalate synthase-encoding genes in yeast.
Insights
Yeast 2-isopropylmalate synthase, a mitochondrial enzyme, has activity primarily in the mitochondrial matrix. Evidence shows a larger polypeptide is imported into mitochondria, while a smaller one is not.
Area of Science:
- Biochemistry
- Molecular Biology
- Yeast Genetics
Background:
- 2-Isopropylmalate synthase (EC 4.1.3.12) is a key enzyme in leucine biosynthesis.
- Its localization within yeast mitochondria has been a subject of investigation.
Purpose of the Study:
- To determine the precise mitochondrial localization of 2-isopropylmalate synthase activity in yeast.
- To investigate the import and processing of 2-isopropylmalate synthase subunits into yeast mitochondria.
Main Methods:
- In vitro translation of yeast RNA followed by immunoprecipitation.
- Import studies using isolated yeast mitochondria.
- Analysis of yeast mutants deficient in 2-isopropylmalate synthase activity.
Main Results:
- Yeast 2-isopropylmalate synthase activity is largely localized to the mitochondrial matrix.
- Two distinct polypeptides related to the enzyme were identified via in vitro translation and immunoprecipitation.
- A larger polypeptide (approx. 65 kDa) is imported into mitochondria in an energy-dependent manner without processing, while a smaller polypeptide (63-64 kDa) is not imported.
- Yeast mutants lacking enzyme activity are deficient in one or both polypeptides.
Conclusions:
- The study provides strong evidence for the mitochondrial matrix localization of 2-isopropylmalate synthase.
- The import of the larger polypeptide into mitochondria suggests a specific targeting mechanism.
- The existence of two distinct polypeptides supports recent findings of two yeast genes encoding 2-isopropylmalate synthase.
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